Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SUMO3P55854 TPTEP1-208ENST00000636884 213 ntBASIC3.48□□□□□ -1.85
SUMO3P55854 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SUMO3P55854 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.48□□□□□ -1.85
SUMO3P55854 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SUMO3P55854 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SUMO3P55854 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
SUMO3P55854 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SUMO3P55854 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SUMO3P55854 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SUMO3P55854 Z98749.2-208ENST00000381646 500 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 PTMAP5-201ENST00000393073 333 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AL122016.1-201ENST00000403365 367 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AC007390.1-201ENST00000415722 356 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AL096701.2-201ENST00000416920 238 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.47□□□□□ -1.85
SUMO3P55854 PGBD4P6-201ENST00000421501 610 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 HMGB1P18-201ENST00000438801 619 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AL359672.1-201ENST00000442302 409 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 MRPL50P4-201ENST00000446432 475 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 AMD1P1-201ENST00000457220 922 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 RN7SL323P-201ENST00000494712 295 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 RPS27AP10-201ENST00000496103 208 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 MTCO1P29-201ENST00000496868 288 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AC103851.1-201ENST00000506833 274 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 MTND3P22-201ENST00000510932 243 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.47□□□□□ -1.85
SUMO3P55854 RN7SKP209-201ENST00000516888 304 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AC011611.1-201ENST00000552179 197 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 RN7SL703P-201ENST00000578485 302 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AC100830.2-201ENST00000581636 240 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.47□□□□□ -1.85
SUMO3P55854 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.47□□□□□ -1.85
SUMO3P55854 AC243960.4-201ENST00000600532 288 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 VN1R85P-201ENST00000601587 426 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 MTND4LP5-201ENST00000605152 292 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 RNU6-85P-201ENST00000605989 107 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 AL138726.1-201ENST00000614873 333 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 ATP5A1P2-202ENST00000616464 443 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 PLCE1P1-201ENST00000622094 305 ntBASIC3.47□□□□□ -1.85
SUMO3P55854 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
SUMO3P55854 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.47□□□□□ -1.85
SUMO3P55854 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.47□□□□□ -1.85
SUMO3P55854 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SUMO3P55854 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SUMO3P55854 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SUMO3P55854 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SUMO3P55854 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SUMO3P55854 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.46□□□□□ -1.86
SUMO3P55854 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SUMO3P55854 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
SUMO3P55854 AC233263.6-201ENST00000631132 1963 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 RNU6-214P-201ENST00000384130 107 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.46□□□□□ -1.86
SUMO3P55854 AC005019.1-201ENST00000436455 431 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 CYCSP32-201ENST00000440548 321 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 RPL32P28-201ENST00000443577 397 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.46□□□□□ -1.86
SUMO3P55854 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.46□□□□□ -1.86
SUMO3P55854 HMGN1P11-201ENST00000508668 303 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 Y_RNA.691-201ENST00000516611 103 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 RNU6-566P-201ENST00000516790 107 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 RNU6-1088P-201ENST00000516850 104 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.46□□□□□ -1.86
SUMO3P55854 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.46□□□□□ -1.86
SUMO3P55854 RAB11AP2-201ENST00000545905 639 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.46□□□□□ -1.86
SUMO3P55854 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.46□□□□□ -1.86
SUMO3P55854 AL117336.2-201ENST00000602435 335 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AP000787.2-201ENST00000604432 568 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 MIR486-1-201ENST00000612171 68 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 uc_338.15-201ENST00000615470 191 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AC009233.1-201ENST00000616477 371 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 Z69720.2-201ENST00000624755 279 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 AL133216.2-202ENST00000634512 349 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
SUMO3P55854 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.46□□□□□ -1.86
SUMO3P55854 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.46□□□□□ -1.86
SUMO3P55854 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms