Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AC024619.4-201ENST00000580924 316 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AC005261.5-201ENST00000596280 355 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AP001981.2-201ENST00000603241 418 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AC023510.2-201ENST00000622162 746 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AP003485.2-201ENST00000623636 610 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 AC017037.3-201ENST00000625016 472 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PKNOX1P55347 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PKNOX1P55347 AC092104.1-201ENST00000497346 1441 ntBASIC2.22□□□□□ -2.05
PKNOX1P55347 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.22□□□□□ -2.05
PKNOX1P55347 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKNOX1P55347 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.21□□□□□ -2.06
PKNOX1P55347 NACAP2-201ENST00000318548 624 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 RNU6-501P-201ENST00000364072 100 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 RNU6-1072P-201ENST00000384703 107 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 RNU6-443P-201ENST00000384780 107 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 U3.26-201ENST00000391236 204 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 USP9YP27-201ENST00000418455 438 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AL592045.1-201ENST00000429867 352 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 MTCYBP39-201ENST00000437562 491 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX1P55347 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX1P55347 HMGN2P10-201ENST00000448085 265 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 MTATP6P7-201ENST00000453315 681 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 RPL37P6-201ENST00000460682 294 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AL121769.1-201ENST00000469473 401 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC004263.1-201ENST00000479327 332 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC004924.1-201ENST00000480160 781 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC090096.1-201ENST00000489168 390 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC026801.1-201ENST00000497178 464 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
PKNOX1P55347 SNORA3.4-201ENST00000515969 96 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKNOX1P55347 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC006199.1-201ENST00000548728 219 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 MRPS36P5-201ENST00000551909 298 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC021739.1-201ENST00000559631 174 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 PCMTD1P2-201ENST00000565017 355 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC023824.2-201ENST00000566185 400 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC073544.2-201ENST00000601155 540 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AL391813.1-201ENST00000603098 260 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 MTCYBP22-201ENST00000603788 447 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC105129.3-201ENST00000605455 485 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC046143.2-201ENST00000609789 160 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC006338.1-201ENST00000618453 749 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 CTSLP2-204ENST00000629029 392 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 AC093591.3-201ENST00000634516 308 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC006927.3-201ENST00000638789 384 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PKNOX1P55347 AC080128.1-201ENST00000474389 1917 ntBASIC2.21□□□□□ -2.06
PKNOX1P55347 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PKNOX1P55347 AC004520.1-201ENST00000608362 1413 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU6-288P-201ENST00000363690 104 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU5E-6P-201ENST00000365574 115 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU6-533P-201ENST00000384144 107 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU1-52P-201ENST00000384190 164 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU6-658P-201ENST00000384606 106 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU6-817P-201ENST00000391083 104 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 SNORD115.1-201ENST00000391109 76 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 FCF1P10-201ENST00000407590 479 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RNU2-62P-201ENST00000410868 191 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AC010099.3-201ENST00000423896 409 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 HMGB3P12-201ENST00000438745 556 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL512286.1-201ENST00000439244 400 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 MTND1P3-201ENST00000484956 952 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RN7SL636P-201ENST00000497504 294 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 RN7SKP287-201ENST00000516546 266 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.2□□□□□ -2.06
PKNOX1P55347 NACAP3-201ENST00000552100 481 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 MIR5697-201ENST00000578045 78 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 MIR4658-201ENST00000584344 65 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL670379.6-201ENST00000603753 252 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL670379.11-201ENST00000604059 253 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL355598.1-201ENST00000604169 202 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC008162.1-201ENST00000604718 254 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL670379.1-201ENST00000604752 252 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AC007938.3-201ENST00000604965 623 ntBASIC2.2□□□□□ -2.06
PKNOX1P55347 AL670379.5-201ENST00000605253 252 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms