Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.68□□□□□ -1.98
VCPP55072 AC108059.3-201ENST00000456388 214 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC010631.1-201ENST00000474150 156 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC138853.1-201ENST00000503549 823 ntBASIC2.68□□□□□ -1.98
VCPP55072 RPL37P25-201ENST00000507308 276 ntBASIC2.68□□□□□ -1.98
VCPP55072 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCPP55072 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.68□□□□□ -1.98
VCPP55072 RNA5SP282-201ENST00000516355 108 ntBASIC2.68□□□□□ -1.98
VCPP55072 RNU6-64P-201ENST00000517119 105 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.68□□□□□ -1.98
VCPP55072 DEFB108A-201ENST00000530110 222 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.68□□□□□ -1.98
VCPP55072 AC123904.2-201ENST00000548059 300 ntBASIC2.68□□□□□ -1.98
VCPP55072 MRPS36P5-201ENST00000551909 298 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.68□□□□□ -1.98
VCPP55072 MIR3915-201ENST00000578518 97 ntBASIC2.68□□□□□ -1.98
VCPP55072 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
VCPP55072 AL022161.1-201ENST00000604390 213 ntBASIC2.68□□□□□ -1.98
VCPP55072 AC103710.1-201ENST00000610003 901 ntBASIC2.68□□□□□ -1.98
VCPP55072 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.68□□□□□ -1.98
VCPP55072 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
VCPP55072 AC007494.3-201ENST00000624660 743 ntBASIC2.68□□□□□ -1.98
VCPP55072 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.68□□□□□ -1.98
VCPP55072 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.68□□□□□ -1.98
VCPP55072 FO624990.1-201ENST00000636373 85 ntBASIC2.68□□□□□ -1.98
VCPP55072 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
VCPP55072 AC022336.2-201ENST00000568966 2538 ntBASIC2.68□□□□□ -1.98
VCPP55072 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCPP55072 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.67□□□□□ -1.98
VCPP55072 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VCPP55072 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.67□□□□□ -1.98
VCPP55072 AL513331.1-201ENST00000411908 397 ntBASIC2.67□□□□□ -1.98
VCPP55072 RPLP0P7-201ENST00000416050 667 ntBASIC2.67□□□□□ -1.98
VCPP55072 USP9YP20-201ENST00000419224 558 ntBASIC2.67□□□□□ -1.98
VCPP55072 MTND2P18-201ENST00000419962 1030 ntBASIC2.67□□□□□ -1.98
VCPP55072 AL353777.1-201ENST00000425552 326 ntBASIC2.67□□□□□ -1.98
VCPP55072 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.67□□□□□ -1.98
VCPP55072 MED14P1-201ENST00000430517 648 ntBASIC2.67□□□□□ -1.98
VCPP55072 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.67□□□□□ -1.98
VCPP55072 FCF1P1-201ENST00000432690 571 ntBASIC2.67□□□□□ -1.98
VCPP55072 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.67□□□□□ -1.98
VCPP55072 TIMM9P1-201ENST00000436122 256 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.67□□□□□ -1.98
VCPP55072 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.67□□□□□ -1.98
VCPP55072 BNIP3P2-201ENST00000441221 577 ntBASIC2.67□□□□□ -1.98
VCPP55072 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.67□□□□□ -1.98
VCPP55072 AC009961.3-201ENST00000449832 765 ntBASIC2.67□□□□□ -1.98
VCPP55072 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.67□□□□□ -1.98
VCPP55072 AP000797.1-201ENST00000478870 387 ntBASIC2.67□□□□□ -1.98
VCPP55072 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC112204.1-201ENST00000502591 103 ntBASIC2.67□□□□□ -1.98
VCPP55072 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.67□□□□□ -1.98
VCPP55072 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.67□□□□□ -1.98
VCPP55072 ZNF519P3-201ENST00000557158 1032 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC109446.2-201ENST00000567872 497 ntBASIC2.67□□□□□ -1.98
VCPP55072 MIR5697-201ENST00000578045 78 ntBASIC2.67□□□□□ -1.98
VCPP55072 AP001981.2-201ENST00000603241 418 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC105129.3-201ENST00000605455 485 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC092354.1-201ENST00000606057 376 ntBASIC2.67□□□□□ -1.98
VCPP55072 AL391813.2-201ENST00000609113 322 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC090970.3-201ENST00000612566 866 ntBASIC2.67□□□□□ -1.98
VCPP55072 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC027807.2-201ENST00000616099 408 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC104010.1-201ENST00000616889 150 ntBASIC2.67□□□□□ -1.98
VCPP55072 AL136313.1-201ENST00000624804 202 ntBASIC2.67□□□□□ -1.98
VCPP55072 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VCPP55072 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VCPP55072 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.67□□□□□ -1.98
VCPP55072 AC093536.2-201ENST00000565257 1406 ntBASIC2.67□□□□□ -1.98
VCPP55072 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
VCPP55072 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VCPP55072 SNORD115.1-201ENST00000391109 76 ntBASIC2.66□□□□□ -1.98
VCPP55072 MIR1287-201ENST00000408492 90 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC092047.1-201ENST00000424997 240 ntBASIC2.66□□□□□ -1.98
VCPP55072 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.66□□□□□ -1.98
VCPP55072 Z82210.1-201ENST00000440037 231 ntBASIC2.66□□□□□ -1.98
VCPP55072 MTND1P26-201ENST00000440488 538 ntBASIC2.66□□□□□ -1.98
VCPP55072 AL590365.1-201ENST00000450788 243 ntBASIC2.66□□□□□ -1.98
VCPP55072 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.66□□□□□ -1.98
VCPP55072 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.66□□□□□ -1.98
VCPP55072 AC109486.1-201ENST00000486833 374 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.66□□□□□ -1.98
VCPP55072 RNU1-104P-201ENST00000517280 175 ntBASIC2.66□□□□□ -1.98
VCPP55072 CKS1BP7-201ENST00000522230 235 ntBASIC2.66□□□□□ -1.98
VCPP55072 OR4R1P-201ENST00000529879 463 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC243972.3-201ENST00000539655 198 ntBASIC2.66□□□□□ -1.98
VCPP55072 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VCPP55072 AC007115.1-201ENST00000546853 234 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC093012.1-202ENST00000549403 582 ntBASIC2.66□□□□□ -1.98
VCPP55072 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
VCPP55072 AL391261.3-201ENST00000557194 520 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.66□□□□□ -1.98
VCPP55072 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.66□□□□□ -1.98
VCPP55072 MIR3146-201ENST00000580367 79 ntBASIC2.66□□□□□ -1.98
VCPP55072 MIR4293-201ENST00000584305 78 ntBASIC2.66□□□□□ -1.98
VCPP55072 HMGN2P15-201ENST00000585707 270 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC060766.3-201ENST00000591442 263 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC002545.1-201ENST00000592511 181 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC108747.1-201ENST00000609508 535 ntBASIC2.66□□□□□ -1.98
VCPP55072 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms