Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 DDX10P1-201ENST00000448545 1933 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HMGCS2P54868 AC092104.1-201ENST00000497346 1441 ntBASIC2.65□□□□□ -1.99
HMGCS2P54868 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.65□□□□□ -1.99
HMGCS2P54868 U8.3-201ENST00000363321 132 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 Y_RNA.201-201ENST00000364052 96 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 RNY4P16-201ENST00000364768 94 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 MIR221-201ENST00000385135 110 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 SNORA40.3-201ENST00000390964 122 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCS2P54868 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCS2P54868 MTCO2P34-201ENST00000421994 607 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AL590383.1-201ENST00000428602 75 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 Z98742.2-201ENST00000431564 187 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCS2P54868 KATNBL1P3-201ENST00000443475 909 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCS2P54868 RNU6-956P-201ENST00000458868 103 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCS2P54868 MTND1P3-201ENST00000484956 952 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 LARP1BP2-201ENST00000486594 519 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 RPL30P5-201ENST00000494923 336 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC009901.1-201ENST00000506703 541 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCS2P54868 RNU6-64P-201ENST00000517119 105 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.64□□□□□ -1.99
HMGCS2P54868 DEFB108A-201ENST00000530110 222 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AP002963.1-201ENST00000530590 184 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 HMGB1P14-201ENST00000557424 591 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.64□□□□□ -1.99
HMGCS2P54868 KC877982.1-201ENST00000602313 470 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AL359999.1-201ENST00000604513 294 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC131902.3-201ENST00000611767 581 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HMGCS2P54868 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCS2P54868 AC090132.2-201ENST00000615881 347 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 AC002064.3-201ENST00000623448 346 ntBASIC2.64□□□□□ -1.99
HMGCS2P54868 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HMGCS2P54868 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HMGCS2P54868 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCS2P54868 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGCS2P54868 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
HMGCS2P54868 AC005832.2-201ENST00000538921 1430 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 MIR21-201ENST00000362134 72 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 Y_RNA.318-201ENST00000365131 97 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 RNY3P13-201ENST00000365542 102 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HMGCS2P54868 SNORA67.3-201ENST00000384366 140 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 DEFB108C-201ENST00000400154 252 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 FCF1P10-201ENST00000407590 479 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGCS2P54868 AC092573.2-201ENST00000434546 243 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.63□□□□□ -1.99
HMGCS2P54868 MTCO3P45-201ENST00000443036 613 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 GAPDHP17-201ENST00000449858 1001 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 SSXP1-201ENST00000453640 473 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AL033528.1-201ENST00000453780 140 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC010099.1-201ENST00000455434 375 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 SNRPFP4-201ENST00000456366 242 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGCS2P54868 RPS20P22-201ENST00000473700 357 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGCS2P54868 RPL31P60-201ENST00000478450 367 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 ARL2BPP4-201ENST00000506854 471 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 MTND4P2-201ENST00000507767 1203 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 RAC1P5-201ENST00000512182 576 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGCS2P54868 MTCO3P28-201ENST00000513351 515 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
HMGCS2P54868 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.63□□□□□ -1.99
HMGCS2P54868 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGCS2P54868 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGCS2P54868 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC105137.2-201ENST00000569073 466 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC064807.4-201ENST00000607201 407 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AL451064.1-201ENST00000607718 471 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC103710.2-201ENST00000609912 942 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC010678.1-201ENST00000614118 713 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AL161629.2-201ENST00000615347 275 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 uc_338.12-201ENST00000616344 181 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 AC084035.1-201ENST00000634543 607 ntBASIC2.63□□□□□ -1.99
HMGCS2P54868 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.62□□□□□ -1.99
HMGCS2P54868 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HMGCS2P54868 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HMGCS2P54868 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HMGCS2P54868 RNU6-223P-201ENST00000362830 107 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 RNU4-24P-201ENST00000364565 139 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HMGCS2P54868 AL591416.1-201ENST00000404015 867 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGCS2P54868 CDK8P2-201ENST00000415020 547 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC018630.2-202ENST00000422992 927 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 HMGN2P30-201ENST00000423237 256 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 RPL7L1P10-201ENST00000427790 463 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AL356867.1-201ENST00000429623 299 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AC009961.2-201ENST00000435771 251 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.62□□□□□ -1.99
HMGCS2P54868 MTATP6P30-201ENST00000443540 664 ntBASIC2.62□□□□□ -1.99
HMGCS2P54868 ELOCP30-201ENST00000447108 299 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms