Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RPEP5-201ENST00000441137 268 ntBASIC4.76□□□□□ -1.65
USP11P51784 IFNWP4-201ENST00000453148 294 ntBASIC4.76□□□□□ -1.65
USP11P51784 RPL37P6-201ENST00000460682 294 ntBASIC4.76□□□□□ -1.65
USP11P51784 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.76□□□□□ -1.65
USP11P51784 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.76□□□□□ -1.65
USP11P51784 AC069113.1-201ENST00000517763 267 ntBASIC4.76□□□□□ -1.65
USP11P51784 AC034114.1-201ENST00000520293 285 ntBASIC4.76□□□□□ -1.65
USP11P51784 MRPL49P2-201ENST00000521066 465 ntBASIC4.76□□□□□ -1.65
USP11P51784 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.76□□□□□ -1.65
USP11P51784 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.76□□□□□ -1.65
USP11P51784 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
USP11P51784 MIR4458-201ENST00000578872 75 ntBASIC4.76□□□□□ -1.65
USP11P51784 MIR3976-201ENST00000606807 139 ntBASIC4.76□□□□□ -1.65
USP11P51784 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.76□□□□□ -1.65
USP11P51784 MIR7702-201ENST00000621931 59 ntBASIC4.76□□□□□ -1.65
USP11P51784 MIR492-201ENST00000638676 116 ntBASIC4.76□□□□□ -1.65
USP11P51784 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
USP11P51784 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP11P51784 AL133412.1-201ENST00000380194 2992 ntBASIC4.76□□□□□ -1.65
USP11P51784 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.76□□□□□ -1.65
USP11P51784 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.76□□□□□ -1.65
USP11P51784 AL049555.1-201ENST00000562834 1933 ntBASIC4.76□□□□□ -1.65
USP11P51784 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
USP11P51784 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP11P51784 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
USP11P51784 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.75□□□□□ -1.65
USP11P51784 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.75□□□□□ -1.65
USP11P51784 Y_RNA.237-201ENST00000364439 102 ntBASIC4.75□□□□□ -1.65
USP11P51784 Y_RNA.270-201ENST00000364693 104 ntBASIC4.75□□□□□ -1.65
USP11P51784 Y_RNA.297-201ENST00000364950 91 ntBASIC4.75□□□□□ -1.65
USP11P51784 SNORA70C-201ENST00000384538 135 ntBASIC4.75□□□□□ -1.65
USP11P51784 Y_RNA.533-201ENST00000384596 114 ntBASIC4.75□□□□□ -1.65
USP11P51784 RNU6-821P-201ENST00000390995 107 ntBASIC4.75□□□□□ -1.65
USP11P51784 RNU2-71P-201ENST00000411395 189 ntBASIC4.75□□□□□ -1.65
USP11P51784 EIF4EP2-201ENST00000422816 654 ntBASIC4.75□□□□□ -1.65
USP11P51784 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.75□□□□□ -1.65
USP11P51784 MED28P2-201ENST00000475771 317 ntBASIC4.75□□□□□ -1.65
USP11P51784 HMGN2P13-201ENST00000476476 274 ntBASIC4.75□□□□□ -1.65
USP11P51784 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.75□□□□□ -1.65
USP11P51784 SNORA31.9-201ENST00000516429 84 ntBASIC4.75□□□□□ -1.65
USP11P51784 RNU6-255P-201ENST00000516957 105 ntBASIC4.75□□□□□ -1.65
USP11P51784 AC144568.1-201ENST00000520139 137 ntBASIC4.75□□□□□ -1.65
USP11P51784 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.75□□□□□ -1.65
USP11P51784 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP11P51784 AC069240.1-201ENST00000548774 375 ntBASIC4.75□□□□□ -1.65
USP11P51784 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.75□□□□□ -1.65
USP11P51784 RPL23AP87-202ENST00000573039 466 ntBASIC4.75□□□□□ -1.65
USP11P51784 CPDP1-201ENST00000579660 283 ntBASIC4.75□□□□□ -1.65
USP11P51784 OR1M4P-201ENST00000589199 287 ntBASIC4.75□□□□□ -1.65
USP11P51784 AL020997.2-201ENST00000602607 184 ntBASIC4.75□□□□□ -1.65
USP11P51784 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP11P51784 AP000560.1-201ENST00000624150 1937 ntBASIC4.75□□□□□ -1.65
USP11P51784 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP11P51784 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP11P51784 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
USP11P51784 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.74□□□□□ -1.65
USP11P51784 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP11P51784 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.74□□□□□ -1.65
USP11P51784 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP11P51784 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP11P51784 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.74□□□□□ -1.65
USP11P51784 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
USP11P51784 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
USP11P51784 RNA5SP52-201ENST00000362448 134 ntBASIC4.74□□□□□ -1.65
USP11P51784 RNA5SP513-201ENST00000364648 118 ntBASIC4.74□□□□□ -1.65
USP11P51784 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP11P51784 SAR1AP2-201ENST00000392696 594 ntBASIC4.74□□□□□ -1.65
USP11P51784 RNU6-607P-201ENST00000411283 108 ntBASIC4.74□□□□□ -1.65
USP11P51784 AL391219.1-201ENST00000422570 483 ntBASIC4.74□□□□□ -1.65
USP11P51784 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.74□□□□□ -1.65
USP11P51784 AC090774.1-201ENST00000435925 246 ntBASIC4.74□□□□□ -1.65
USP11P51784 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.74□□□□□ -1.65
USP11P51784 ACA59.1-201ENST00000515966 143 ntBASIC4.74□□□□□ -1.65
USP11P51784 RN7SKP258-201ENST00000517151 304 ntBASIC4.74□□□□□ -1.65
USP11P51784 RN7SKP234-201ENST00000517173 224 ntBASIC4.74□□□□□ -1.65
USP11P51784 TRAV32-201ENST00000553993 340 ntBASIC4.74□□□□□ -1.65
USP11P51784 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.74□□□□□ -1.65
USP11P51784 AC004584.2-201ENST00000570407 410 ntBASIC4.74□□□□□ -1.65
USP11P51784 HNRNPCP4-201ENST00000571636 900 ntBASIC4.74□□□□□ -1.65
USP11P51784 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.74□□□□□ -1.65
USP11P51784 MIR5701-3-201ENST00000578890 82 ntBASIC4.74□□□□□ -1.65
USP11P51784 LRRC37A5P-203ENST00000580181 585 ntBASIC4.74□□□□□ -1.65
USP11P51784 MIR3133-201ENST00000583157 78 ntBASIC4.74□□□□□ -1.65
USP11P51784 MIR5701-1-201ENST00000585138 82 ntBASIC4.74□□□□□ -1.65
USP11P51784 RPS29P30-201ENST00000600975 111 ntBASIC4.74□□□□□ -1.65
USP11P51784 AC012669.1-201ENST00000603209 283 ntBASIC4.74□□□□□ -1.65
USP11P51784 MIR432-201ENST00000606207 94 ntBASIC4.74□□□□□ -1.65
USP11P51784 MIR5701-2-201ENST00000615634 82 ntBASIC4.74□□□□□ -1.65
USP11P51784 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP11P51784 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP11P51784 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.74□□□□□ -1.65
USP11P51784 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
USP11P51784 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
USP11P51784 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.74□□□□□ -1.65
USP11P51784 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
USP11P51784 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
USP11P51784 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.74□□□□□ -1.65
USP11P51784 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
USP11P51784 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP11P51784 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms