Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU5A-6P-201ENST00000384136 116 ntBASIC2.63□□□□□ -1.99
CDX1P47902 RNU6-1060P-201ENST00000384664 107 ntBASIC2.63□□□□□ -1.99
CDX1P47902 MIR454-201ENST00000390180 115 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AL139039.1-201ENST00000401900 692 ntBASIC2.63□□□□□ -1.99
CDX1P47902 RNA5SP120-201ENST00000410900 112 ntBASIC2.63□□□□□ -1.99
CDX1P47902 BTF3L4P1-201ENST00000413813 468 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC245054.2-201ENST00000415639 319 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AL356968.1-201ENST00000416622 474 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX1P47902 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDX1P47902 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX1P47902 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX1P47902 AL161651.1-201ENST00000440882 223 ntBASIC2.63□□□□□ -1.99
CDX1P47902 RPS3AP12-201ENST00000443616 753 ntBASIC2.63□□□□□ -1.99
CDX1P47902 NIPA2P5-201ENST00000452282 464 ntBASIC2.63□□□□□ -1.99
CDX1P47902 RNU7-182P-201ENST00000459009 62 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC110794.1-201ENST00000505816 425 ntBASIC2.63□□□□□ -1.99
CDX1P47902 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDX1P47902 AC105313.1-201ENST00000509121 353 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC098799.2-201ENST00000509466 868 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC098591.2-201ENST00000510152 315 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.63□□□□□ -1.99
CDX1P47902 GLYCAM1-201ENST00000546596 285 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC006199.1-201ENST00000548728 219 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX1P47902 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.63□□□□□ -1.99
CDX1P47902 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX1P47902 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.63□□□□□ -1.99
CDX1P47902 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CDX1P47902 AL356321.1-201ENST00000621360 228 ntBASIC2.63□□□□□ -1.99
CDX1P47902 SEPT14P19-203ENST00000633205 211 ntBASIC2.63□□□□□ -1.99
CDX1P47902 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CDX1P47902 AC004944.1-201ENST00000517807 3059 ntBASIC2.63□□□□□ -1.99
CDX1P47902 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.63□□□□□ -1.99
CDX1P47902 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CDX1P47902 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CDX1P47902 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
CDX1P47902 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CDX1P47902 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX1P47902 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.62□□□□□ -1.99
CDX1P47902 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
CDX1P47902 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX1P47902 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDX1P47902 RNA5SP387-201ENST00000364226 106 ntBASIC2.62□□□□□ -1.99
CDX1P47902 Y_RNA.296-201ENST00000364930 108 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RNU6-1280P-201ENST00000365211 107 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RNU6-116P-201ENST00000384042 109 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RNU6-1119P-201ENST00000384349 108 ntBASIC2.62□□□□□ -1.99
CDX1P47902 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDX1P47902 SNORA40C-201ENST00000391285 128 ntBASIC2.62□□□□□ -1.99
CDX1P47902 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX1P47902 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX1P47902 AC005326.1-201ENST00000429197 123 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MTCO2P11-201ENST00000431069 680 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MTCO3P5-201ENST00000433620 714 ntBASIC2.62□□□□□ -1.99
CDX1P47902 OSTCP8-201ENST00000445117 448 ntBASIC2.62□□□□□ -1.99
CDX1P47902 BTF3P15-201ENST00000455606 336 ntBASIC2.62□□□□□ -1.99
CDX1P47902 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX1P47902 AC006512.1-201ENST00000468816 291 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RPL21P13-201ENST00000488305 481 ntBASIC2.62□□□□□ -1.99
CDX1P47902 EIF4EP3-201ENST00000498782 656 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RNU6-581P-201ENST00000516214 105 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RNU6-56P-201ENST00000516986 93 ntBASIC2.62□□□□□ -1.99
CDX1P47902 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX1P47902 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX1P47902 AP003392.2-201ENST00000527269 208 ntBASIC2.62□□□□□ -1.99
CDX1P47902 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDX1P47902 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
CDX1P47902 CYCSP39-201ENST00000565821 309 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MTND1P15-201ENST00000579262 949 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MIR5195-201ENST00000583555 115 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MIR4276-201ENST00000584832 70 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MIR548AC-201ENST00000585049 88 ntBASIC2.62□□□□□ -1.99
CDX1P47902 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
CDX1P47902 AL022154.1-201ENST00000604698 785 ntBASIC2.62□□□□□ -1.99
CDX1P47902 AC245008.1-201ENST00000608123 476 ntBASIC2.62□□□□□ -1.99
CDX1P47902 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.62□□□□□ -1.99
CDX1P47902 AC092656.1-203ENST00000624134 423 ntBASIC2.62□□□□□ -1.99
CDX1P47902 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MIR7515-201ENST00000637837 67 ntBASIC2.62□□□□□ -1.99
CDX1P47902 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
CDX1P47902 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CDX1P47902 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.62□□□□□ -1.99
CDX1P47902 AC017071.1-201ENST00000564407 2204 ntBASIC2.62□□□□□ -1.99
CDX1P47902 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDX1P47902 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.62□□□□□ -1.99
CDX1P47902 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CDX1P47902 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CDX1P47902 AL663109.1-201ENST00000411498 844 ntBASIC2.61□□□□□ -1.99
CDX1P47902 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 OR51A5P-201ENST00000415429 942 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 AC006028.1-201ENST00000438379 402 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AL513043.1-201ENST00000439124 535 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 AC092001.1-201ENST00000453012 261 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.61□□□□□ -1.99
CDX1P47902 AL122001.1-201ENST00000457027 370 ntBASIC2.61□□□□□ -1.99
CDX1P47902 MTCO2P18-201ENST00000457151 658 ntBASIC2.61□□□□□ -1.99
CDX1P47902 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms