Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RNY4P34-201ENST00000364779 95 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 RNU1-100P-201ENST00000365255 165 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 Y_RNA.436-201ENST00000384097 102 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 FO393413.1-201ENST00000402892 195 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 RPL21P24-201ENST00000413752 448 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 RPS15AP12-201ENST00000419498 388 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 OOSP1P1-201ENST00000423265 274 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 AC009961.2-201ENST00000435771 251 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.64□□□□□ -1.99
BRCC3P46736 SSXP1-201ENST00000453640 473 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AL033528.1-201ENST00000453780 140 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 MTCO2P18-201ENST00000457151 658 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.64□□□□□ -1.99
BRCC3P46736 AC008481.1-201ENST00000463278 396 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BRCC3P46736 LARP1BP2-201ENST00000486594 519 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.64□□□□□ -1.99
BRCC3P46736 SEM1P1-201ENST00000506694 209 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 ARL2BPP4-201ENST00000506854 471 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC008549.1-201ENST00000512900 643 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.64□□□□□ -1.99
BRCC3P46736 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 RNA5SP337-201ENST00000517007 109 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AP002963.1-201ENST00000530590 184 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
BRCC3P46736 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.64□□□□□ -1.99
BRCC3P46736 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 AF038458.1-201ENST00000588406 262 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 DUXAP4-201ENST00000603046 613 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC116312.1-201ENST00000606841 314 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 AC103591.3-201ENST00000608684 209 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 uc_338.12-201ENST00000616344 181 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 SNHG22-203ENST00000617833 660 ntBASIC2.64□□□□□ -1.99
BRCC3P46736 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
BRCC3P46736 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BRCC3P46736 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
BRCC3P46736 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.63□□□□□ -1.99
BRCC3P46736 RNA5SP139-201ENST00000364340 117 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.63□□□□□ -1.99
BRCC3P46736 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 RNU6-1027P-201ENST00000383998 107 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 RPS3AP36-201ENST00000398190 775 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AL359511.1-201ENST00000402970 211 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 CDK8P2-201ENST00000415020 547 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.63□□□□□ -1.99
BRCC3P46736 AL365496.1-201ENST00000426885 215 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AC093106.2-201ENST00000428212 385 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 RPL36AP6-201ENST00000435770 321 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.63□□□□□ -1.99
BRCC3P46736 AC244505.5-201ENST00000443639 207 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.63□□□□□ -1.99
BRCC3P46736 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.63□□□□□ -1.99
BRCC3P46736 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.63□□□□□ -1.99
BRCC3P46736 RN7SL636P-201ENST00000497504 294 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 MTND4P2-201ENST00000507767 1203 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.63□□□□□ -1.99
BRCC3P46736 Y_RNA.672-201ENST00000516289 104 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AP000873.5-201ENST00000533906 236 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.63□□□□□ -1.99
BRCC3P46736 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.63□□□□□ -1.99
BRCC3P46736 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
BRCC3P46736 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.63□□□□□ -1.99
BRCC3P46736 DPPA3P3-201ENST00000603842 430 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AC064872.1-201ENST00000604823 1072 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AC090578.1-201ENST00000604955 591 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AC121334.2-201ENST00000605387 271 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 AL451064.1-201ENST00000607718 471 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
BRCC3P46736 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.63□□□□□ -1.99
BRCC3P46736 AC069528.2-201ENST00000624849 1991 ntBASIC2.63□□□□□ -1.99
BRCC3P46736 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BRCC3P46736 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BRCC3P46736 AC099654.7-201ENST00000635788 2127 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
BRCC3P46736 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
BRCC3P46736 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.62□□□□□ -1.99
BRCC3P46736 RNU6-511P-201ENST00000363496 107 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 RNU6-198P-201ENST00000384258 104 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
BRCC3P46736 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.62□□□□□ -1.99
BRCC3P46736 AL356057.2-201ENST00000403318 432 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 AL359634.1-202ENST00000404721 284 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 RNU2-36P-201ENST00000410361 191 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.62□□□□□ -1.99
BRCC3P46736 BX682237.1-201ENST00000415016 335 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 BX295541.1-201ENST00000417774 250 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 ISCA1P6-201ENST00000427740 390 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 USP9YP14-201ENST00000430663 563 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.62□□□□□ -1.99
BRCC3P46736 AC020550.1-201ENST00000447385 163 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.62□□□□□ -1.99
BRCC3P46736 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.62□□□□□ -1.99
BRCC3P46736 AC013267.1-201ENST00000458227 267 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 RNU7-23P-201ENST00000459465 62 ntBASIC2.62□□□□□ -1.99
BRCC3P46736 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.62□□□□□ -1.99
BRCC3P46736 MTCO3P7-201ENST00000510008 774 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms