Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.09□□□□□ -1.91
HADHAP40939 AC011471.1-201ENST00000585766 187 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AL022154.1-201ENST00000604698 785 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AC013562.2-201ENST00000611632 603 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AC092656.1-203ENST00000624134 423 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AC009161.2-201ENST00000624626 138 ntBASIC3.09□□□□□ -1.91
HADHAP40939 AL035425.3-201ENST00000564206 4996 ntBASIC3.09□□□□□ -1.92
HADHAP40939 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HADHAP40939 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HADHAP40939 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.08□□□□□ -1.92
HADHAP40939 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HADHAP40939 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HADHAP40939 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.08□□□□□ -1.92
HADHAP40939 RNU6-181P-201ENST00000363225 107 ntBASIC3.08□□□□□ -1.92
HADHAP40939 SNORD56.5-201ENST00000364281 72 ntBASIC3.08□□□□□ -1.92
HADHAP40939 RNU5A-6P-201ENST00000384136 116 ntBASIC3.08□□□□□ -1.92
HADHAP40939 RNU6-74P-201ENST00000384235 107 ntBASIC3.08□□□□□ -1.92
HADHAP40939 MIR454-201ENST00000390180 115 ntBASIC3.08□□□□□ -1.92
HADHAP40939 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HADHAP40939 Y_RNA.582-201ENST00000391023 95 ntBASIC3.08□□□□□ -1.92
HADHAP40939 SNORA48.5-201ENST00000391143 135 ntBASIC3.08□□□□□ -1.92
HADHAP40939 DEFB108C-201ENST00000400154 252 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AL663109.1-201ENST00000411498 844 ntBASIC3.08□□□□□ -1.92
HADHAP40939 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HADHAP40939 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AC092809.3-201ENST00000415453 231 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.08□□□□□ -1.92
HADHAP40939 GTF2IP20-201ENST00000431663 360 ntBASIC3.08□□□□□ -1.92
HADHAP40939 RPS15AP27-201ENST00000449183 343 ntBASIC3.08□□□□□ -1.92
HADHAP40939 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.08□□□□□ -1.92
HADHAP40939 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HADHAP40939 AC105252.1-201ENST00000503089 286 ntBASIC3.08□□□□□ -1.92
HADHAP40939 SEM1P1-201ENST00000506694 209 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.08□□□□□ -1.92
HADHAP40939 RNU6-445P-201ENST00000516949 107 ntBASIC3.08□□□□□ -1.92
HADHAP40939 SNORD19.2-201ENST00000516978 73 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.08□□□□□ -1.92
HADHAP40939 PSMA2P1-201ENST00000526365 646 ntBASIC3.08□□□□□ -1.92
HADHAP40939 RANP3-201ENST00000530970 276 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.08□□□□□ -1.92
HADHAP40939 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.08□□□□□ -1.92
HADHAP40939 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AL137843.1-201ENST00000605078 385 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AL121992.2-201ENST00000606262 256 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AC135507.2-201ENST00000612443 309 ntBASIC3.08□□□□□ -1.92
HADHAP40939 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.08□□□□□ -1.92
HADHAP40939 AC136475.10-201ENST00000620253 385 ntBASIC3.08□□□□□ -1.92
HADHAP40939 MIR3199-2-201ENST00000636243 86 ntBASIC3.08□□□□□ -1.92
HADHAP40939 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.08□□□□□ -1.92
HADHAP40939 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.08□□□□□ -1.92
HADHAP40939 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HADHAP40939 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HADHAP40939 RNU4-40P-201ENST00000364351 143 ntBASIC3.07□□□□□ -1.92
HADHAP40939 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.07□□□□□ -1.92
HADHAP40939 Y_RNA.367-201ENST00000365544 101 ntBASIC3.07□□□□□ -1.92
HADHAP40939 SNORA4.3-201ENST00000365564 137 ntBASIC3.07□□□□□ -1.92
HADHAP40939 RNU6-750P-201ENST00000390946 107 ntBASIC3.07□□□□□ -1.92
HADHAP40939 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.07□□□□□ -1.92
HADHAP40939 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.07□□□□□ -1.92
HADHAP40939 USP9YP6-201ENST00000413550 854 ntBASIC3.07□□□□□ -1.92
HADHAP40939 BTF3L4P1-201ENST00000413813 468 ntBASIC3.07□□□□□ -1.92
HADHAP40939 MTCYBP5-201ENST00000423752 1135 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AC093151.1-201ENST00000427711 313 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 MTCYBP1-201ENST00000454315 1119 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.07□□□□□ -1.92
HADHAP40939 RN7SL633P-201ENST00000488974 297 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 RPS29P20-201ENST00000489592 171 ntBASIC3.07□□□□□ -1.92
HADHAP40939 MTCO3P7-201ENST00000510008 774 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 MTND3P5-201ENST00000512798 333 ntBASIC3.07□□□□□ -1.92
HADHAP40939 RNU6-685P-201ENST00000517088 95 ntBASIC3.07□□□□□ -1.92
HADHAP40939 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HADHAP40939 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.07□□□□□ -1.92
HADHAP40939 AC007536.1-201ENST00000533382 349 ntBASIC3.07□□□□□ -1.92
HADHAP40939 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HADHAP40939 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HADHAP40939 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 MIR4782-201ENST00000577987 79 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.07□□□□□ -1.92
HADHAP40939 AL355877.2-201ENST00000603670 358 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AC007938.3-201ENST00000604965 623 ntBASIC3.07□□□□□ -1.92
HADHAP40939 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HADHAP40939 UCA1.1-201ENST00000620952 75 ntBASIC3.07□□□□□ -1.92
HADHAP40939 AL157786.1-207ENST00000627771 695 ntBASIC3.07□□□□□ -1.92
HADHAP40939 U6.114-201ENST00000636407 96 ntBASIC3.07□□□□□ -1.92
HADHAP40939 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.07□□□□□ -1.92
HADHAP40939 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HADHAP40939 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HADHAP40939 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.07□□□□□ -1.92
HADHAP40939 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
HADHAP40939 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HADHAP40939 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HADHAP40939 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HADHAP40939 RNA5SP374-201ENST00000362939 125 ntBASIC3.06□□□□□ -1.92
HADHAP40939 RNU6-1103P-201ENST00000384150 107 ntBASIC3.06□□□□□ -1.92
HADHAP40939 RNU6-456P-201ENST00000384493 107 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms