Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SRIP1-201ENST00000489235 288 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.54□□□□□ -2
HMGCLP35914 AC008716.1-201ENST00000511084 513 ntBASIC2.54□□□□□ -2
HMGCLP35914 MTCO3P28-201ENST00000513351 515 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.54□□□□□ -2
HMGCLP35914 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
HMGCLP35914 RNU2-10P-201ENST00000516375 211 ntBASIC2.54□□□□□ -2
HMGCLP35914 RNU6-1256P-201ENST00000516539 103 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC090572.1-201ENST00000519251 160 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.54□□□□□ -2
HMGCLP35914 AC022616.3-201ENST00000523940 148 ntBASIC2.54□□□□□ -2
HMGCLP35914 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.54□□□□□ -2
HMGCLP35914 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
HMGCLP35914 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.54□□□□□ -2
HMGCLP35914 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.54□□□□□ -2
HMGCLP35914 AC006362.1-201ENST00000567392 174 ntBASIC2.54□□□□□ -2
HMGCLP35914 MIR3162-201ENST00000581818 82 ntBASIC2.54□□□□□ -2
HMGCLP35914 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
HMGCLP35914 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
HMGCLP35914 AP002360.4-201ENST00000606980 481 ntBASIC2.54□□□□□ -2
HMGCLP35914 AC011939.3-201ENST00000613686 466 ntBASIC2.54□□□□□ -2
HMGCLP35914 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.53□□□□□ -2
HMGCLP35914 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGCLP35914 AL049641.1-201ENST00000441055 1948 ntBASIC2.53□□□□□ -2
HMGCLP35914 Y_RNA.194-201ENST00000363985 102 ntBASIC2.53□□□□□ -2
HMGCLP35914 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
HMGCLP35914 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.53□□□□□ -2
HMGCLP35914 Y_RNA.510-201ENST00000384511 114 ntBASIC2.53□□□□□ -2
HMGCLP35914 RPS3AP36-201ENST00000398190 775 ntBASIC2.53□□□□□ -2
HMGCLP35914 RNU2-36P-201ENST00000410361 191 ntBASIC2.53□□□□□ -2
HMGCLP35914 AC137499.1-201ENST00000427602 88 ntBASIC2.53□□□□□ -2
HMGCLP35914 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.53□□□□□ -2
HMGCLP35914 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.53□□□□□ -2
HMGCLP35914 AC104850.1-201ENST00000435940 476 ntBASIC2.53□□□□□ -2
HMGCLP35914 PIGFP3-201ENST00000441918 722 ntBASIC2.53□□□□□ -2
HMGCLP35914 AL136380.1-201ENST00000447970 162 ntBASIC2.53□□□□□ -2
HMGCLP35914 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.53□□□□□ -2
HMGCLP35914 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.53□□□□□ -2
HMGCLP35914 AL049874.1-201ENST00000489560 388 ntBASIC2.53□□□□□ -2
HMGCLP35914 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.53□□□□□ -2
HMGCLP35914 AC091133.4-201ENST00000511142 308 ntBASIC2.53□□□□□ -2
HMGCLP35914 TBCAP3-201ENST00000512475 312 ntBASIC2.53□□□□□ -2
HMGCLP35914 MTCO2P4-201ENST00000517968 247 ntBASIC2.53□□□□□ -2
HMGCLP35914 AC011979.2-201ENST00000527568 352 ntBASIC2.53□□□□□ -2
HMGCLP35914 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.53□□□□□ -2
HMGCLP35914 AC135279.1-201ENST00000543493 504 ntBASIC2.53□□□□□ -2
HMGCLP35914 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.53□□□□□ -2
HMGCLP35914 AC009163.5-201ENST00000575421 637 ntBASIC2.53□□□□□ -2
HMGCLP35914 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
HMGCLP35914 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.53□□□□□ -2
HMGCLP35914 AC034102.8-201ENST00000615146 484 ntBASIC2.53□□□□□ -2
HMGCLP35914 AC008250.2-201ENST00000615261 205 ntBASIC2.53□□□□□ -2
HMGCLP35914 AC092656.1-203ENST00000624134 423 ntBASIC2.53□□□□□ -2
HMGCLP35914 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.53□□□□□ -2
HMGCLP35914 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
HMGCLP35914 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2
HMGCLP35914 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HMGCLP35914 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
HMGCLP35914 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2.01
HMGCLP35914 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HMGCLP35914 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCLP35914 Y_RNA.22-201ENST00000362492 102 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RNU6-270P-201ENST00000364131 105 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RNU6-217P-201ENST00000384164 104 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 MRPL42P2-201ENST00000403169 426 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCLP35914 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCLP35914 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 FCF1P1-201ENST00000432690 571 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 Z82210.1-201ENST00000440037 231 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RPS3P1-201ENST00000456781 192 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RNU6-420P-201ENST00000458780 107 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 KC877373.1-201ENST00000479066 408 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.52□□□□□ -2.01
HMGCLP35914 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCLP35914 RPL37P25-201ENST00000507308 276 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 MTND3P5-201ENST00000512798 333 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RN7SKP24-201ENST00000515888 284 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RNU1-103P-201ENST00000516502 125 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 SNORA18.6-201ENST00000516792 115 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 RNU6-1092P-201ENST00000516955 87 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC090136.1-201ENST00000520009 240 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCLP35914 ATP5F1P5-201ENST00000526403 760 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.52□□□□□ -2.01
HMGCLP35914 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCLP35914 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.52□□□□□ -2.01
HMGCLP35914 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.52□□□□□ -2.01
HMGCLP35914 AC040904.1-201ENST00000590850 223 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.6-201ENST00000603753 252 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.11-201ENST00000604059 253 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC008162.1-201ENST00000604718 254 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.1-201ENST00000604752 252 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.5-201ENST00000605253 252 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.12-201ENST00000605291 253 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.8-201ENST00000605353 252 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AL670379.7-201ENST00000605823 252 ntBASIC2.52□□□□□ -2.01
HMGCLP35914 AC006338.1-201ENST00000618453 749 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms