Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HMGB1P11-201ENST00000413899 637 ntBASIC2.19□□□□□ -2.06
RORAP35398 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.19□□□□□ -2.06
RORAP35398 RPL22P18-201ENST00000417197 377 ntBASIC2.19□□□□□ -2.06
RORAP35398 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.19□□□□□ -2.06
RORAP35398 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RORAP35398 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
RORAP35398 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.19□□□□□ -2.06
RORAP35398 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.19□□□□□ -2.06
RORAP35398 AL353705.4-201ENST00000449661 238 ntBASIC2.19□□□□□ -2.06
RORAP35398 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.19□□□□□ -2.06
RORAP35398 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.19□□□□□ -2.06
RORAP35398 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.19□□□□□ -2.06
RORAP35398 RPL37P6-201ENST00000460682 294 ntBASIC2.19□□□□□ -2.06
RORAP35398 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
RORAP35398 RPL23AP49-201ENST00000492925 468 ntBASIC2.19□□□□□ -2.06
RORAP35398 RPF2P2-201ENST00000504693 896 ntBASIC2.19□□□□□ -2.06
RORAP35398 AC098591.2-201ENST00000510152 315 ntBASIC2.19□□□□□ -2.06
RORAP35398 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.19□□□□□ -2.06
RORAP35398 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.19□□□□□ -2.06
RORAP35398 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.19□□□□□ -2.06
RORAP35398 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.19□□□□□ -2.06
RORAP35398 DEFB108A-201ENST00000530110 222 ntBASIC2.19□□□□□ -2.06
RORAP35398 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.19□□□□□ -2.06
RORAP35398 MIR5571-201ENST00000577998 113 ntBASIC2.19□□□□□ -2.06
RORAP35398 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
RORAP35398 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.19□□□□□ -2.06
RORAP35398 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.19□□□□□ -2.06
RORAP35398 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
RORAP35398 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RORAP35398 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
RORAP35398 AC021755.4-201ENST00000616620 456 ntBASIC2.19□□□□□ -2.06
RORAP35398 AL031667.3-201ENST00000620124 655 ntBASIC2.19□□□□□ -2.06
RORAP35398 AL391262.2-201ENST00000622466 494 ntBASIC2.19□□□□□ -2.06
RORAP35398 AP002791.1-201ENST00000623291 381 ntBASIC2.19□□□□□ -2.06
RORAP35398 MIR7157-201ENST00000635801 60 ntBASIC2.19□□□□□ -2.06
RORAP35398 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
RORAP35398 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RORAP35398 MIR21-201ENST00000362134 72 ntBASIC2.18□□□□□ -2.06
RORAP35398 AL591416.1-201ENST00000404015 867 ntBASIC2.18□□□□□ -2.06
RORAP35398 AL355497.1-201ENST00000406262 551 ntBASIC2.18□□□□□ -2.06
RORAP35398 SNORD23.1-201ENST00000408212 104 ntBASIC2.18□□□□□ -2.06
RORAP35398 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.18□□□□□ -2.06
RORAP35398 CYCSP48-201ENST00000417124 323 ntBASIC2.18□□□□□ -2.06
RORAP35398 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.18□□□□□ -2.06
RORAP35398 DPH3P2-201ENST00000422618 250 ntBASIC2.18□□□□□ -2.06
RORAP35398 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.18□□□□□ -2.06
RORAP35398 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 MED14P1-201ENST00000430517 648 ntBASIC2.18□□□□□ -2.06
RORAP35398 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.18□□□□□ -2.06
RORAP35398 TIMM9P1-201ENST00000436122 256 ntBASIC2.18□□□□□ -2.06
RORAP35398 IPO7P1-201ENST00000442031 636 ntBASIC2.18□□□□□ -2.06
RORAP35398 AC010095.1-201ENST00000443543 144 ntBASIC2.18□□□□□ -2.06
RORAP35398 GDI2P2-201ENST00000445131 608 ntBASIC2.18□□□□□ -2.06
RORAP35398 FABP5P15-201ENST00000453566 214 ntBASIC2.18□□□□□ -2.06
RORAP35398 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.18□□□□□ -2.06
RORAP35398 RPL23AP41-201ENST00000484754 458 ntBASIC2.18□□□□□ -2.06
RORAP35398 LINC00888-204ENST00000487386 421 ntBASIC2.18□□□□□ -2.06
RORAP35398 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.18□□□□□ -2.06
RORAP35398 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 AP003467.2-201ENST00000520175 319 ntBASIC2.18□□□□□ -2.06
RORAP35398 AC010186.2-204ENST00000537668 439 ntBASIC2.18□□□□□ -2.06
RORAP35398 SNRPGP18-201ENST00000553000 214 ntBASIC2.18□□□□□ -2.06
RORAP35398 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 AC026464.5-201ENST00000562497 722 ntBASIC2.18□□□□□ -2.06
RORAP35398 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.18□□□□□ -2.06
RORAP35398 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 MIR3124-201ENST00000582636 67 ntBASIC2.18□□□□□ -2.06
RORAP35398 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.18□□□□□ -2.06
RORAP35398 AC105148.1-201ENST00000604961 409 ntBASIC2.18□□□□□ -2.06
RORAP35398 AC107214.2-201ENST00000608204 634 ntBASIC2.18□□□□□ -2.06
RORAP35398 TUSC7.1-201ENST00000610969 165 ntBASIC2.18□□□□□ -2.06
RORAP35398 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RORAP35398 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RORAP35398 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
RORAP35398 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RORAP35398 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.17□□□□□ -2.06
RORAP35398 RNU2-68P-201ENST00000410878 191 ntBASIC2.17□□□□□ -2.06
RORAP35398 RPL26P27-201ENST00000414397 437 ntBASIC2.17□□□□□ -2.06
RORAP35398 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 RPS24P7-201ENST00000416921 246 ntBASIC2.17□□□□□ -2.06
RORAP35398 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 ISCA1P1-201ENST00000426679 387 ntBASIC2.17□□□□□ -2.06
RORAP35398 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.17□□□□□ -2.06
RORAP35398 AC098831.1-201ENST00000440661 216 ntBASIC2.17□□□□□ -2.06
RORAP35398 AC108059.3-201ENST00000456388 214 ntBASIC2.17□□□□□ -2.06
RORAP35398 MTCO1P42-201ENST00000457379 726 ntBASIC2.17□□□□□ -2.06
RORAP35398 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
RORAP35398 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.17□□□□□ -2.06
RORAP35398 AC112673.1-201ENST00000513168 575 ntBASIC2.17□□□□□ -2.06
RORAP35398 RNA5SP165-201ENST00000517142 115 ntBASIC2.17□□□□□ -2.06
RORAP35398 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.17□□□□□ -2.06
RORAP35398 AP006587.4-201ENST00000526053 529 ntBASIC2.17□□□□□ -2.06
RORAP35398 MTATP6P15-201ENST00000527233 835 ntBASIC2.17□□□□□ -2.06
RORAP35398 AP000889.2-201ENST00000532684 490 ntBASIC2.17□□□□□ -2.06
RORAP35398 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.17□□□□□ -2.06
RORAP35398 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms