Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNA5SP383-201ENST00000362934 120 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 RNU1-105P-201ENST00000363470 161 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 RNU4-12P-201ENST00000365233 139 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HOXC8P31273 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 BTF3P7-201ENST00000407097 488 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC8P31273 MTND3P17-201ENST00000416968 344 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC8P31273 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC245291.1-201ENST00000419501 328 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC8P31273 MTND3P21-201ENST00000433774 331 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AL596276.1-201ENST00000434465 418 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC8P31273 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 MTCO2P3-201ENST00000442543 421 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC8P31273 PSPHP1-201ENST00000450062 261 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC8P31273 AL135752.1-201ENST00000479477 471 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 RN7SL633P-201ENST00000488974 297 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC8P31273 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC8P31273 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC8P31273 AL133241.1-201ENST00000556832 487 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC8P31273 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC8P31273 AC090517.2-201ENST00000614966 680 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 AC073534.2-201ENST00000620377 381 ntBASIC3.14□□□□□ -1.91
HOXC8P31273 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC8P31273 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC8P31273 AL359693.1-201ENST00000614959 2407 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC093536.2-201ENST00000565257 1406 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC091564.4-201ENST00000533934 2194 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC8P31273 FTLP6-201ENST00000355274 422 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RNU6-181P-201ENST00000363225 107 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 Y_RNA.248-201ENST00000364501 109 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 SNORA20.2-201ENST00000383922 131 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 MIR181A1-201ENST00000385026 110 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RNU6-780P-201ENST00000391030 104 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 SNORD115-47-201ENST00000391226 86 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 MTCO3P40-201ENST00000392516 676 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 CALM2P3-201ENST00000400429 449 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RNU2-33P-201ENST00000410344 192 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RNU2-62P-201ENST00000410868 191 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC8P31273 AL592148.1-201ENST00000413568 445 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC092047.1-201ENST00000424997 240 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC133104.1-201ENST00000429100 218 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC073464.1-201ENST00000429823 534 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.13□□□□□ -1.91
HOXC8P31273 MTCO2P11-201ENST00000431069 680 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 TIMM9P1-201ENST00000436122 256 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 BNIP3P2-201ENST00000441221 577 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC8P31273 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC8P31273 SNORD109B-201ENST00000458961 67 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 SNORD109A-201ENST00000459128 67 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RPS27P29-201ENST00000463110 252 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC8P31273 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXC8P31273 HMGB1P29-201ENST00000505659 499 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC8P31273 AC010493.1-201ENST00000513479 292 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RNU6-445P-201ENST00000516949 107 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 RNU6-1220P-201ENST00000517126 108 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC100870.1-201ENST00000522035 505 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.13□□□□□ -1.91
HOXC8P31273 MIR3167-201ENST00000579623 85 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 KC877982.1-201ENST00000602313 470 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 AC007619.2-201ENST00000605743 379 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 MTND1P37-201ENST00000636562 264 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 API5P2-201ENST00000397055 1498 ntBASIC3.13□□□□□ -1.91
HOXC8P31273 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.13□□□□□ -1.91
HOXC8P31273 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HOXC8P31273 Y_RNA.1-201ENST00000352915 104 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 RNU1-112P-201ENST00000364401 164 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 U3.12-201ENST00000364498 214 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 Y_RNA.409-201ENST00000383990 98 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 RNU6-140P-201ENST00000384566 108 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 SNORA46-201ENST00000384762 135 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 AL138827.1-201ENST00000402666 306 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 AL590002.1-201ENST00000406554 418 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 RNA5SP21-201ENST00000410917 96 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXC8P31273 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC8P31273 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.12□□□□□ -1.91
HOXC8P31273 ELOCP4-201ENST00000420090 333 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 HMGB1P27-201ENST00000431429 603 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 RPS20P5-201ENST00000434808 360 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
HOXC8P31273 AC002486.1-201ENST00000435098 391 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.12□□□□□ -1.91
HOXC8P31273 AC003071.1-201ENST00000451219 789 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms