Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 GPM6BP2-201ENST00000432046 144 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 OR2B8P-201ENST00000432841 938 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC236972.1-201ENST00000433225 199 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.18□□□□□ -1.9
HOXA13P31271 GPM6BP1-201ENST00000446387 144 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 CECR9-201ENST00000453421 199 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC010099.1-201ENST00000455434 375 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 RPL12P25-201ENST00000455592 494 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXA13P31271 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA13P31271 AC117522.1-201ENST00000509821 380 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC011352.1-201ENST00000512300 793 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA13P31271 SCARNA24.1-201ENST00000516465 137 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA13P31271 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA13P31271 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXA13P31271 HMGB1P14-201ENST00000557424 591 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA13P31271 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA13P31271 AP001094.1-201ENST00000579805 193 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 MTATP6P3-201ENST00000581686 676 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXA13P31271 AL035413.2-201ENST00000604801 525 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC092954.2-201ENST00000609103 430 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC107294.1-201ENST00000609524 467 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AC007684.1-201ENST00000609671 477 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AL020991.1-201ENST00000612314 373 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 AL161629.2-201ENST00000615347 275 ntBASIC3.18□□□□□ -1.9
HOXA13P31271 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA13P31271 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA13P31271 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXA13P31271 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXA13P31271 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXA13P31271 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AC062016.1-201ENST00000355719 319 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 MIR558-201ENST00000384920 94 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 SAR1AP2-201ENST00000392696 594 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AL360182.1-201ENST00000397433 468 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA13P31271 AC092047.1-201ENST00000424997 240 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 MED13P1-201ENST00000428342 171 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AC133104.1-201ENST00000429100 218 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXA13P31271 RPL23AP30-201ENST00000432419 501 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 GPR143P-201ENST00000434155 205 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 HMGB3P12-201ENST00000438745 556 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA13P31271 RPS3AP17-201ENST00000472594 777 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AC007182.2-201ENST00000489251 402 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 RNU6-506P-201ENST00000516553 94 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA13P31271 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 HPRT1P3-201ENST00000539521 576 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA13P31271 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA13P31271 MIR4672-201ENST00000583126 81 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXA13P31271 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 BNIP3P9-201ENST00000603714 553 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AL161798.1-201ENST00000604630 131 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AC130324.3-201ENST00000614165 542 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 AC136475.10-201ENST00000620253 385 ntBASIC3.17□□□□□ -1.9
HOXA13P31271 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXA13P31271 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOXA13P31271 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 FTLP6-201ENST00000355274 422 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXA13P31271 Y_RNA.296-201ENST00000364930 108 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RNU6-282P-201ENST00000365357 103 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 Y_RNA.372-201ENST00000365599 102 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RNU5A-6P-201ENST00000384136 116 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 UBE2V1P2-201ENST00000397758 440 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC114491.1-201ENST00000416095 246 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXA13P31271 AC099548.1-201ENST00000421443 426 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 MTCO3P30-201ENST00000426425 670 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RPL36AP53-201ENST00000432891 316 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AL591212.2-201ENST00000433923 257 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXA13P31271 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXA13P31271 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 SNORD109B-201ENST00000458961 67 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 SNORD109A-201ENST00000459128 67 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC003982.1-202ENST00000469928 248 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AP004217.1-201ENST00000480579 346 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXA13P31271 AC233702.1-201ENST00000482905 502 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC108078.1-201ENST00000508073 725 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.16□□□□□ -1.9
HOXA13P31271 AC010493.1-201ENST00000513479 292 ntBASIC3.16□□□□□ -1.9
HOXA13P31271 RNU6-718P-201ENST00000516166 105 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms