Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MTND4P35-201ENST00000604257 1375 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HOXA9P31269 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 SNORA23-201ENST00000365128 182 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 RNU1-51P-201ENST00000365345 176 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 RNU6-1035P-201ENST00000384477 107 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 SNORA80E-201ENST00000384744 137 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 MIR19A-201ENST00000384878 82 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL023284.1-201ENST00000403956 276 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXA9P31269 AF274854.1-201ENST00000413236 615 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC007560.1-201ENST00000426912 237 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL445646.1-201ENST00000431784 216 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXA9P31269 MTCYBP39-201ENST00000437562 491 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXA9P31269 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXA9P31269 MTCO1P42-201ENST00000457379 726 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC055855.1-201ENST00000489563 579 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC005178.1-201ENST00000508392 440 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC026407.1-201ENST00000518369 204 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXA9P31269 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXA9P31269 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC012435.1-202ENST00000568772 240 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXA9P31269 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXA9P31269 WISP1-OT1-201ENST00000602893 642 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 MTCYBP22-201ENST00000603788 447 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL357094.1-201ENST00000603845 844 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXA9P31269 AL391813.2-201ENST00000609113 322 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC103710.1-201ENST00000610003 901 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC009318.2-201ENST00000610917 651 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AL138713.1-201ENST00000624026 2130 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC091965.5-201ENST00000624785 342 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 AC019226.2-201ENST00000625973 424 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 MIR7515-201ENST00000637837 67 ntBASIC2.25□□□□□ -2.05
HOXA9P31269 OR4G2P-202ENST00000641004 1759 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 RNU5A-1-201ENST00000362698 116 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 MIR514A1-201ENST00000385133 98 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 RNU6-1140P-201ENST00000410517 106 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 USP9YP26-201ENST00000421008 661 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 NDUFB4P7-201ENST00000423198 363 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AL590383.1-201ENST00000428602 75 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AL512286.1-201ENST00000439244 400 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 PGBD4P3-201ENST00000440731 581 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC009237.8-201ENST00000445492 379 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 EPS15P1-201ENST00000448836 336 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXA9P31269 AP1S2P1-201ENST00000457344 379 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AL049874.1-201ENST00000489560 388 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 RPS15AP36-201ENST00000492022 382 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA9P31269 AC010486.2-201ENST00000505572 483 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 RNU6-232P-201ENST00000517144 64 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXA9P31269 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXA9P31269 MTND3P12-201ENST00000559068 328 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC091489.2-201ENST00000566263 604 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC145350.1-201ENST00000567426 208 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXA9P31269 AC013553.2-201ENST00000604244 589 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC112187.2-201ENST00000604345 283 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC135507.1-201ENST00000607214 561 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC093838.1-201ENST00000613014 469 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 TUG1_2.1-201ENST00000614234 87 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC010378.1-201ENST00000619270 362 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC079416.3-201ENST00000624479 549 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC006927.3-201ENST00000638789 384 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
HOXA9P31269 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA9P31269 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA9P31269 AC005832.2-201ENST00000538921 1430 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
HOXA9P31269 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA9P31269 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA9P31269 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HOXA9P31269 Y_RNA.46-201ENST00000362695 102 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 RNU6-553P-201ENST00000364047 96 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 RNU6-270P-201ENST00000364131 105 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 Y_RNA.560-201ENST00000384689 102 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 U8.13-201ENST00000390842 128 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 U8.14-201ENST00000390843 143 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 SNORA26.9-201ENST00000391322 122 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 RPS20P2-201ENST00000402520 389 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 RNU6-920P-201ENST00000410926 92 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 MTND4P20-201ENST00000424125 869 ntBASIC2.23□□□□□ -2.05
HOXA9P31269 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXA9P31269 AL365184.2-201ENST00000431139 435 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms