Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.17□□□□□ -1.74
CNGA1P29973 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.17□□□□□ -1.74
CNGA1P29973 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CNGA1P29973 AP001148.1-201ENST00000624124 2359 ntBASIC4.17□□□□□ -1.74
CNGA1P29973 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CNGA1P29973 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNGA1P29973 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CNGA1P29973 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNGA1P29973 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.16□□□□□ -1.74
CNGA1P29973 RNA5SP295-201ENST00000362655 121 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 Y_RNA.72-201ENST00000362894 103 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 SNORA72.1-201ENST00000363485 129 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 RNU6-270P-201ENST00000364131 105 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 SNORA38.1-201ENST00000364172 131 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 Y_RNA.279-201ENST00000364763 95 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 HLFP1-201ENST00000402375 499 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 Y_RNA.604-201ENST00000410574 102 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 Y_RNA.615-201ENST00000410769 117 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 RPL21P90-201ENST00000415692 466 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AL159169.1-201ENST00000421119 127 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.16□□□□□ -1.74
CNGA1P29973 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.16□□□□□ -1.74
CNGA1P29973 AC115115.1-201ENST00000449927 248 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 RPL12P25-201ENST00000455592 494 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AL590639.1-201ENST00000456484 337 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC008716.1-201ENST00000511084 513 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC025465.4-201ENST00000513422 638 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC112206.3-201ENST00000514578 389 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 RNU1-103P-201ENST00000516502 125 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.16□□□□□ -1.74
CNGA1P29973 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CNGA1P29973 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.16□□□□□ -1.74
CNGA1P29973 AC023050.3-201ENST00000541142 333 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC090115.3-201ENST00000553218 849 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.16□□□□□ -1.74
CNGA1P29973 MIR3609-201ENST00000582661 80 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC073539.2-201ENST00000597113 165 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC007938.3-201ENST00000604965 623 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 AC100810.6-201ENST00000638068 285 ntBASIC4.16□□□□□ -1.74
CNGA1P29973 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNGA1P29973 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNGA1P29973 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CNGA1P29973 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNGA1P29973 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CNGA1P29973 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CNGA1P29973 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNGA1P29973 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNGA1P29973 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNGA1P29973 TNPO1P3-201ENST00000436471 2662 ntBASIC4.15□□□□□ -1.74
CNGA1P29973 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNGA1P29973 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.15□□□□□ -1.75
CNGA1P29973 AL162578.1-201ENST00000406202 378 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 POLHP1-201ENST00000411806 470 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 CYCSP4-201ENST00000429682 331 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.15□□□□□ -1.75
CNGA1P29973 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.15□□□□□ -1.75
CNGA1P29973 RNU7-167P-201ENST00000459160 62 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC008155.2-201ENST00000464337 397 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 DYNLL1P5-201ENST00000467158 270 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 RN7SL807P-201ENST00000470923 297 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.15□□□□□ -1.75
CNGA1P29973 RPL30P14-201ENST00000482744 348 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC139453.3-201ENST00000493276 369 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.15□□□□□ -1.75
CNGA1P29973 AC010486.1-201ENST00000511793 424 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 RNA5SP208-201ENST00000516156 78 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 RNU6-928P-201ENST00000516876 104 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 RNU6-1231P-201ENST00000517185 103 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.15□□□□□ -1.75
CNGA1P29973 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.15□□□□□ -1.75
CNGA1P29973 RPL7P20-201ENST00000520308 745 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 MIR4298-201ENST00000584380 73 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.15□□□□□ -1.75
CNGA1P29973 BNIP3P25-201ENST00000596023 559 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.15□□□□□ -1.75
CNGA1P29973 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.15□□□□□ -1.75
CNGA1P29973 U2.17-201ENST00000611454 95 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AL355073.2-201ENST00000612106 557 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC068831.7-201ENST00000616954 363 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC103705.1-201ENST00000619013 241 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 AC092794.2-201ENST00000620933 563 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.15□□□□□ -1.75
CNGA1P29973 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
CNGA1P29973 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CNGA1P29973 AC121333.1-201ENST00000567488 2709 ntBASIC4.15□□□□□ -1.75
CNGA1P29973 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNGA1P29973 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNGA1P29973 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNGA1P29973 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.14□□□□□ -1.75
CNGA1P29973 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.14□□□□□ -1.75
CNGA1P29973 AC025518.1-201ENST00000479856 347 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 SNORA70.18-201ENST00000516696 98 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNGA1P29973 AC012119.1-201ENST00000603184 222 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 AL136221.1-201ENST00000621449 509 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 AL008636.1-201ENST00000625038 1018 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 U2.21-201ENST00000637295 81 ntBASIC4.14□□□□□ -1.75
CNGA1P29973 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms