Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC022447.4-201ENST00000504053 364 ntBASIC5.06□□□□□ -1.6
RXRBP28702 AC097462.2-201ENST00000504623 481 ntBASIC5.06□□□□□ -1.6
RXRBP28702 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.06□□□□□ -1.6
RXRBP28702 RNU6-237P-201ENST00000515985 71 ntBASIC5.06□□□□□ -1.6
RXRBP28702 RNU2-69P-201ENST00000516061 100 ntBASIC5.06□□□□□ -1.6
RXRBP28702 SUB1P3-201ENST00000564581 315 ntBASIC5.06□□□□□ -1.6
RXRBP28702 RPL23AP84-201ENST00000571193 464 ntBASIC5.06□□□□□ -1.6
RXRBP28702 AC006254.3-201ENST00000603353 884 ntBASIC5.06□□□□□ -1.6
RXRBP28702 U2.17-201ENST00000611454 95 ntBASIC5.06□□□□□ -1.6
RXRBP28702 AC007998.5-201ENST00000622938 237 ntBASIC5.06□□□□□ -1.6
RXRBP28702 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RXRBP28702 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RXRBP28702 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.06□□□□□ -1.6
RXRBP28702 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.06□□□□□ -1.6
RXRBP28702 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RXRBP28702 AC005183.1-201ENST00000603687 1979 ntBASIC5.05□□□□□ -1.6
RXRBP28702 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RXRBP28702 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.05□□□□□ -1.6
RXRBP28702 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RXRBP28702 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.05□□□□□ -1.6
RXRBP28702 RNU6-770P-201ENST00000363929 105 ntBASIC5.05□□□□□ -1.6
RXRBP28702 Y_RNA.276-201ENST00000364732 109 ntBASIC5.05□□□□□ -1.6
RXRBP28702 SNORA23-201ENST00000365128 182 ntBASIC5.05□□□□□ -1.6
RXRBP28702 SMIM11P1-201ENST00000369586 178 ntBASIC5.05□□□□□ -1.6
RXRBP28702 RNU6-713P-201ENST00000384761 107 ntBASIC5.05□□□□□ -1.6
RXRBP28702 SNORA3C-201ENST00000408792 125 ntBASIC5.05□□□□□ -1.6
RXRBP28702 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.05□□□□□ -1.6
RXRBP28702 RNU2-15P-201ENST00000410692 191 ntBASIC5.05□□□□□ -1.6
RXRBP28702 RNA5SP146-201ENST00000410743 123 ntBASIC5.05□□□□□ -1.6
RXRBP28702 ELOCP20-201ENST00000422460 345 ntBASIC5.05□□□□□ -1.6
RXRBP28702 PSMA2P3-201ENST00000429685 675 ntBASIC5.05□□□□□ -1.6
RXRBP28702 AL158071.1-201ENST00000430315 461 ntBASIC5.05□□□□□ -1.6
RXRBP28702 AL392103.1-201ENST00000447000 198 ntBASIC5.05□□□□□ -1.6
RXRBP28702 snoU13.7-201ENST00000459220 104 ntBASIC5.05□□□□□ -1.6
RXRBP28702 Y_RNA.638-201ENST00000459374 113 ntBASIC5.05□□□□□ -1.6
RXRBP28702 AC108751.2-201ENST00000469993 231 ntBASIC5.05□□□□□ -1.6
RXRBP28702 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.05□□□□□ -1.6
RXRBP28702 AC010683.1-201ENST00000473673 378 ntBASIC5.05□□□□□ -1.6
RXRBP28702 AC135721.1-201ENST00000497954 479 ntBASIC5.05□□□□□ -1.6
RXRBP28702 COX7A2P2-201ENST00000505291 250 ntBASIC5.05□□□□□ -1.6
RXRBP28702 OR5D17P-201ENST00000531492 978 ntBASIC5.05□□□□□ -1.6
RXRBP28702 RRN3P3-201ENST00000549207 578 ntBASIC5.05□□□□□ -1.6
RXRBP28702 HSBP1P1-201ENST00000555205 166 ntBASIC5.05□□□□□ -1.6
RXRBP28702 AL137100.2-201ENST00000555786 315 ntBASIC5.05□□□□□ -1.6
RXRBP28702 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.05□□□□□ -1.6
RXRBP28702 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.05□□□□□ -1.6
RXRBP28702 MIR4272-201ENST00000635924 64 ntBASIC5.05□□□□□ -1.6
RXRBP28702 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.05□□□□□ -1.6
RXRBP28702 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RXRBP28702 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RXRBP28702 EXOC5P1-201ENST00000510543 1969 ntBASIC5.05□□□□□ -1.6
RXRBP28702 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RXRBP28702 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RXRBP28702 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RXRBP28702 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 CEP170P1-201ENST00000502249 4587 ntBASIC5.04□□□□□ -1.6
RXRBP28702 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.04□□□□□ -1.6
RXRBP28702 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.04□□□□□ -1.6
RXRBP28702 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRBP28702 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RXRBP28702 Y_RNA.2-201ENST00000362330 96 ntBASIC5.04□□□□□ -1.6
RXRBP28702 SNORA5B-201ENST00000363786 132 ntBASIC5.04□□□□□ -1.6
RXRBP28702 RNU6-7-201ENST00000364784 107 ntBASIC5.04□□□□□ -1.6
RXRBP28702 RNU6-806P-201ENST00000365147 105 ntBASIC5.04□□□□□ -1.6
RXRBP28702 RNU6-8-201ENST00000365467 107 ntBASIC5.04□□□□□ -1.6
RXRBP28702 Y_RNA.477-201ENST00000384352 108 ntBASIC5.04□□□□□ -1.6
RXRBP28702 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RXRBP28702 U3.29-201ENST00000391296 212 ntBASIC5.04□□□□□ -1.6
RXRBP28702 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRBP28702 MTCO2P33-201ENST00000402100 465 ntBASIC5.04□□□□□ -1.6
RXRBP28702 AL590135.1-201ENST00000422215 156 ntBASIC5.04□□□□□ -1.6
RXRBP28702 RPS26P47-201ENST00000427219 348 ntBASIC5.04□□□□□ -1.6
RXRBP28702 SDAD1P3-201ENST00000427380 333 ntBASIC5.04□□□□□ -1.6
RXRBP28702 AC099799.1-201ENST00000439809 192 ntBASIC5.04□□□□□ -1.6
RXRBP28702 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRBP28702 BX276092.4-201ENST00000452056 248 ntBASIC5.04□□□□□ -1.6
RXRBP28702 MTND4LP30-201ENST00000454092 297 ntBASIC5.04□□□□□ -1.6
RXRBP28702 AC005008.1-201ENST00000456151 612 ntBASIC5.04□□□□□ -1.6
RXRBP28702 AP001086.1-201ENST00000494882 321 ntBASIC5.04□□□□□ -1.6
RXRBP28702 AC026801.1-201ENST00000497178 464 ntBASIC5.04□□□□□ -1.6
RXRBP28702 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.04□□□□□ -1.6
RXRBP28702 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRBP28702 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRBP28702 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.04□□□□□ -1.6
RXRBP28702 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRBP28702 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RXRBP28702 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
RXRBP28702 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 RNU6-200P-201ENST00000364743 107 ntBASIC5.03□□□□□ -1.6
RXRBP28702 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.03□□□□□ -1.6
RXRBP28702 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRBP28702 RNU6-393P-201ENST00000384475 107 ntBASIC5.03□□□□□ -1.6
RXRBP28702 Y_RNA.555-201ENST00000384673 110 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms