Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.39□□□□□ -1.71
ITGA4P13612 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.39□□□□□ -1.71
ITGA4P13612 MIR1273C-201ENST00000578669 77 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.39□□□□□ -1.71
ITGA4P13612 AL160281.1-201ENST00000605307 311 ntBASIC4.39□□□□□ -1.71
ITGA4P13612 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.39□□□□□ -1.71
ITGA4P13612 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ITGA4P13612 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ITGA4P13612 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ITGA4P13612 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ITGA4P13612 Y_RNA.80-201ENST00000362996 102 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 Y_RNA.452-201ENST00000384202 108 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ITGA4P13612 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.38□□□□□ -1.71
ITGA4P13612 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.38□□□□□ -1.71
ITGA4P13612 RPL23AP31-201ENST00000456160 467 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 RPL21P129-201ENST00000491732 478 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 RNU6-1256P-201ENST00000516539 103 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 RNU6-264P-201ENST00000517134 104 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.38□□□□□ -1.71
ITGA4P13612 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.38□□□□□ -1.71
ITGA4P13612 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.38□□□□□ -1.71
ITGA4P13612 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 MED28P6-201ENST00000558776 231 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 HSPE1P5-201ENST00000561489 272 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 MIR5685-201ENST00000579080 79 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 AC092447.9-201ENST00000603395 144 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 AC123912.5-201ENST00000605470 343 ntBASIC4.38□□□□□ -1.71
ITGA4P13612 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
ITGA4P13612 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ITGA4P13612 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ITGA4P13612 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.38□□□□□ -1.71
ITGA4P13612 MARK2P15-201ENST00000432204 2186 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AC005592.1-201ENST00000566527 1640 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 Y_RNA.33-201ENST00000362591 102 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 Y_RNA.149-201ENST00000363558 117 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 RNU1-115P-201ENST00000365329 160 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 RNU6-395P-201ENST00000365662 106 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AL359837.1-201ENST00000381357 287 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 RNU6-505P-201ENST00000384427 107 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 SNORA41-201ENST00000384675 132 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AL030996.1-201ENST00000411430 235 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 MRPS18CP6-201ENST00000423587 223 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AC096644.2-201ENST00000429278 159 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AL158071.1-201ENST00000430315 461 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AL133396.1-201ENST00000432048 687 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 snoU13.24-201ENST00000458998 104 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 AC116655.1-201ENST00000508324 901 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 SCARNA15.2-201ENST00000516409 127 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 MIR892C-201ENST00000516410 77 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 TRAV37-201ENST00000553906 342 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 AC074050.1-201ENST00000563247 211 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.37□□□□□ -1.71
ITGA4P13612 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.37□□□□□ -1.71
ITGA4P13612 7SK.7-201ENST00000603504 247 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.37□□□□□ -1.71
ITGA4P13612 RMST_4.1-201ENST00000616886 107 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 Z69720.2-201ENST00000624755 279 ntBASIC4.37□□□□□ -1.71
ITGA4P13612 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.37□□□□□ -1.71
ITGA4P13612 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.37□□□□□ -1.71
ITGA4P13612 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.37□□□□□ -1.71
ITGA4P13612 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ITGA4P13612 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
ITGA4P13612 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ITGA4P13612 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ITGA4P13612 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ITGA4P13612 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.37□□□□□ -1.71
ITGA4P13612 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.37□□□□□ -1.71
ITGA4P13612 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ITGA4P13612 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
ITGA4P13612 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.36□□□□□ -1.71
ITGA4P13612 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ITGA4P13612 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ITGA4P13612 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ITGA4P13612 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.36□□□□□ -1.71
ITGA4P13612 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.36□□□□□ -1.71
ITGA4P13612 Y_RNA.47-201ENST00000362697 108 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 Y_RNA.401-201ENST00000383965 117 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 Y_RNA.455-201ENST00000384230 98 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 MIR23B-201ENST00000384832 97 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 Y_RNA.645-201ENST00000391229 102 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 RNU6-1025P-201ENST00000410629 104 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.36□□□□□ -1.71
ITGA4P13612 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.36□□□□□ -1.71
ITGA4P13612 AC011742.1-201ENST00000431448 434 ntBASIC4.36□□□□□ -1.71
ITGA4P13612 RPS24P6-201ENST00000452670 400 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms