Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC004908.2-201ENST00000609090 574 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXC6P09630 AP001148.1-201ENST00000624124 2359 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 ASNSP3-201ENST00000451989 1306 ntBASIC3.39□□□□□ -1.87
HOXC6P09630 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HOXC6P09630 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC6P09630 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC6P09630 SNORA62.1-201ENST00000364287 154 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 SNORD81.2-201ENST00000365153 76 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC6P09630 SNORA32.2-201ENST00000384049 122 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 MIR558-201ENST00000384920 94 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 RNU6-821P-201ENST00000390995 107 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AL162578.1-201ENST00000406202 378 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 RPL32P35-201ENST00000415214 394 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC016831.2-201ENST00000417179 352 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC063976.3-201ENST00000426849 329 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC008850.1-201ENST00000427546 362 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC6P09630 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC6P09630 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC073415.1-201ENST00000449240 153 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AL356010.1-201ENST00000456364 102 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 RPS15AP36-201ENST00000492022 382 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC6P09630 AC112206.3-201ENST00000514578 389 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 RNU6-1153P-201ENST00000516760 105 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 DEFB108D-201ENST00000527787 222 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC6P09630 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC6P09630 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXC6P09630 CYCSP39-201ENST00000565821 309 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 MIR4795-201ENST00000584182 89 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 MIR4293-201ENST00000584305 78 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC6P09630 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXC6P09630 AL121757.2-201ENST00000611223 313 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 U73479.1-201ENST00000618062 168 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC090617.10-201ENST00000624308 134 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 AC244517.1-201ENST00000606030 2086 ntBASIC3.38□□□□□ -1.87
HOXC6P09630 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXC6P09630 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
HOXC6P09630 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXC6P09630 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC6P09630 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC6P09630 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HOXC6P09630 RNU4-82P-201ENST00000362443 140 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 RNU4-48P-201ENST00000365559 182 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 RNU6-641P-201ENST00000384006 107 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 SNORA18.3-201ENST00000384122 132 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HOXC6P09630 RNA5SP118-201ENST00000410385 109 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXC6P09630 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC6P09630 DUTP6-201ENST00000425573 462 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 RPL21P40-201ENST00000428586 483 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC6P09630 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC6P09630 RPL32P28-201ENST00000443577 397 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 MTND3P16-201ENST00000452205 344 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC6P09630 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC6P09630 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC6P09630 AC092436.1-201ENST00000506450 503 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC6P09630 SCGB1D5P-201ENST00000515134 247 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 RNA5SP217-201ENST00000515959 91 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 Y_RNA.675-201ENST00000516389 149 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 SNORD60.2-201ENST00000516883 86 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXC6P09630 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXC6P09630 AC107953.1-201ENST00000522216 297 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXC6P09630 AC011979.2-201ENST00000527568 352 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC243972.3-201ENST00000539655 198 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 ANP32BP3-201ENST00000559213 706 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AL031176.1-201ENST00000604554 466 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXC6P09630 AL136221.1-201ENST00000621449 509 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC6P09630 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC6P09630 OR4G1P-203ENST00000641984 1631 ntBASIC3.37□□□□□ -1.87
HOXC6P09630 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC6P09630 MTCO1P9-201ENST00000505577 1534 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXC6P09630 Y_RNA.72-201ENST00000362894 103 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 RNU6-432P-201ENST00000384196 109 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 Y_RNA.535-201ENST00000384612 99 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 MIR454-201ENST00000390180 115 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AL139095.1-201ENST00000404326 391 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 Y_RNA.615-201ENST00000410769 117 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 UBE2FP1-201ENST00000416536 447 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC6P09630 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 TAAR7P-201ENST00000436141 242 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 DDX3P2-201ENST00000446138 111 ntBASIC3.36□□□□□ -1.87
HOXC6P09630 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms