Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CXCL1P09341 AC068338.1-201ENST00000565567 176 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 BNIP3P22-201ENST00000593399 556 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AL713866.2-201ENST00000603579 219 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.1□□□□□ -2.23
CXCL1P09341 AC253576.2-201ENST00000618815 580 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AC099842.1-201ENST00000619919 596 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 MIR7843-201ENST00000622274 79 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 AL118508.4-201ENST00000624142 1176 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.1□□□□□ -2.23
CXCL1P09341 MIR1322-201ENST00000638013 71 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CXCL1P09341 AC006026.1-201ENST00000444025 1803 ntBASIC1.1□□□□□ -2.23
CXCL1P09341 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.1□□□□□ -2.23
CXCL1P09341 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
CXCL1P09341 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
CXCL1P09341 TXNP7-201ENST00000406296 293 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.09□□□□□ -2.23
CXCL1P09341 AL139421.1-201ENST00000423010 169 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.09□□□□□ -2.23
CXCL1P09341 HMGN2P3-201ENST00000433603 273 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC015922.2-201ENST00000435593 184 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AL353706.1-201ENST00000436728 494 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 HMGN2P5-201ENST00000436882 273 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC092427.1-201ENST00000439177 601 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.09□□□□□ -2.23
CXCL1P09341 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 BX322784.1-201ENST00000455793 1077 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC068587.2-201ENST00000478386 781 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.09□□□□□ -2.23
CXCL1P09341 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.09□□□□□ -2.23
CXCL1P09341 RNU6-362P-201ENST00000516736 90 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 RNA5SP165-201ENST00000517142 115 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CXCL1P09341 AP003497.1-201ENST00000528472 562 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AP004247.1-201ENST00000531556 1289 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.09□□□□□ -2.23
CXCL1P09341 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.09□□□□□ -2.23
CXCL1P09341 AC012213.3-201ENST00000577199 777 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC018638.7-201ENST00000605836 1114 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.09□□□□□ -2.23
CXCL1P09341 AC008121.3-201ENST00000618726 433 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 U1.36-201ENST00000620684 176 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC009268.2-201ENST00000621925 457 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 AC138627.2-201ENST00000624202 601 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.09□□□□□ -2.23
CXCL1P09341 MTND4P23-201ENST00000447723 1363 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 Y_RNA.25-201ENST00000362528 102 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 RNU6-216P-201ENST00000363282 104 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 RNU6-481P-201ENST00000384194 107 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 SNORA40.18-201ENST00000391200 128 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 RSL24D1P4-201ENST00000400938 484 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 DHFRP6-201ENST00000401776 268 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 UBE2FP1-201ENST00000416536 447 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 SDAD1P3-201ENST00000427380 333 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AL121601.2-201ENST00000438019 707 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.08□□□□□ -2.24
CXCL1P09341 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.08□□□□□ -2.24
CXCL1P09341 FCF1P6-201ENST00000456841 595 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.08□□□□□ -2.24
CXCL1P09341 snoU13.8-201ENST00000458890 104 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 RPL31P58-201ENST00000469001 379 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AC114981.1-201ENST00000503897 678 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AC098862.1-201ENST00000504991 413 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.08□□□□□ -2.24
CXCL1P09341 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
CXCL1P09341 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.08□□□□□ -2.24
CXCL1P09341 AL356432.3-201ENST00000568952 465 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.08□□□□□ -2.24
CXCL1P09341 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.08□□□□□ -2.24
CXCL1P09341 AL139344.1-201ENST00000605228 195 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AC006338.1-201ENST00000618453 749 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.08□□□□□ -2.24
CXCL1P09341 AC091812.1-201ENST00000432235 1948 ntBASIC1.08□□□□□ -2.24
CXCL1P09341 RNU5E-1-201ENST00000362477 120 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 SNORD114-1-201ENST00000362705 72 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 U8.1-201ENST00000362843 134 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 MIR758-201ENST00000390227 88 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AL590084.2-201ENST00000401481 382 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AL591034.2-201ENST00000402839 359 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 RNU4-27P-201ENST00000410889 139 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AC078974.1-201ENST00000411597 223 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 MTND1P21-201ENST00000412991 285 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCL1P09341 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCL1P09341 AC027644.1-201ENST00000419595 298 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 USP9YP22-201ENST00000438971 294 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CXCL1P09341 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.07□□□□□ -2.24
CXCL1P09341 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL1P09341 HMGN2P23-201ENST00000456759 269 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.07□□□□□ -2.24
CXCL1P09341 AC008628.1-201ENST00000508663 265 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AP001189.2-201ENST00000527320 189 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 CYB5AP5-201ENST00000549779 389 ntBASIC1.07□□□□□ -2.24
CXCL1P09341 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms