Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 USP9YP33-201ENST00000412220 421 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AL358075.3-201ENST00000426289 226 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 USP9YP35-201ENST00000435696 412 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC009296.1-201ENST00000443146 155 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
COL4A2P08572 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AP1S2P1-201ENST00000457344 379 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.49□□□□□ -2.17
COL4A2P08572 AL135752.1-201ENST00000479477 471 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC034244.1-201ENST00000507687 207 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC024589.1-201ENST00000512207 263 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 RNA5SP291-201ENST00000517222 105 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.49□□□□□ -2.17
COL4A2P08572 GLYCAM1-201ENST00000546596 285 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AL132857.1-201ENST00000555180 708 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 ANP32BP3-201ENST00000559213 706 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COL4A2P08572 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.49□□□□□ -2.17
COL4A2P08572 AC010133.1-201ENST00000615809 842 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 AC009269.6-201ENST00000621778 588 ntBASIC1.49□□□□□ -2.17
COL4A2P08572 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A2P08572 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A2P08572 AC011477.1-204ENST00000623416 1325 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 RNU6-289P-201ENST00000364093 107 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 RNU6-270P-201ENST00000364131 105 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 RNU6-140P-201ENST00000384566 108 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 MIR613-201ENST00000385248 95 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 BX682237.1-201ENST00000415016 335 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 BX119904.4-201ENST00000424402 301 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A2P08572 UBBP3-201ENST00000445497 241 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 BMI1P1-201ENST00000445879 941 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 PAXBP1P1-201ENST00000449315 447 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 ZNF886P-201ENST00000450781 723 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 TRGVB-201ENST00000453257 471 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A2P08572 RNU7-23P-201ENST00000459465 62 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.48□□□□□ -2.17
COL4A2P08572 AL049874.1-201ENST00000489560 388 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 AC138853.1-201ENST00000503549 823 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A2P08572 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A2P08572 MIR449C-201ENST00000516047 92 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.48□□□□□ -2.17
COL4A2P08572 AP003497.1-201ENST00000528472 562 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COL4A2P08572 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.48□□□□□ -2.17
COL4A2P08572 AC008015.1-201ENST00000555505 465 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.48□□□□□ -2.17
COL4A2P08572 AC092574.1-201ENST00000609771 420 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 AC068944.2-201ENST00000610373 403 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 MIR6767-201ENST00000637302 66 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 AP003399.1-201ENST00000637534 361 ntBASIC1.48□□□□□ -2.17
COL4A2P08572 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.47□□□□□ -2.17
COL4A2P08572 AC121333.1-201ENST00000567488 2709 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 AL138713.1-201ENST00000624026 2130 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
COL4A2P08572 RNU6-413P-201ENST00000384115 107 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A2P08572 MIR320C1-201ENST00000408566 88 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 MEMO1P3-201ENST00000459811 302 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 MRPS17P3-201ENST00000465453 385 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 RPL31P41-201ENST00000477967 372 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 LARP1BP2-201ENST00000486594 519 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 AC109445.1-201ENST00000512356 383 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.47□□□□□ -2.17
COL4A2P08572 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.47□□□□□ -2.17
COL4A2P08572 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.47□□□□□ -2.17
COL4A2P08572 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.47□□□□□ -2.17
COL4A2P08572 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A2P08572 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A2P08572 VN1R83P-201ENST00000595685 445 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 RNU6-88P-201ENST00000606801 100 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 AL161734.1-201ENST00000609720 557 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.47□□□□□ -2.17
COL4A2P08572 AP000676.3-201ENST00000623299 569 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 CR848007.1-201ENST00000442354 1699 ntBASIC1.47□□□□□ -2.17
COL4A2P08572 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
COL4A2P08572 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
COL4A2P08572 AC007785.2-201ENST00000598627 1916 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL4A2P08572 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AL355143.1-201ENST00000407101 841 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.46□□□□□ -2.18
COL4A2P08572 AL365400.1-201ENST00000431854 640 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 SNRPEP7-201ENST00000438350 220 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A2P08572 OSTCP8-201ENST00000445117 448 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC009474.2-201ENST00000451383 136 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.46□□□□□ -2.18
COL4A2P08572 AL160314.1-201ENST00000490836 438 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL4A2P08572 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.46□□□□□ -2.18
COL4A2P08572 AC116353.3-201ENST00000511215 249 ntBASIC1.46□□□□□ -2.18
COL4A2P08572 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms