Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL109913.1-201ENST00000421173 514 ntBASIC3.13□□□□□ -1.91
RB1P06400 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.13□□□□□ -1.91
RB1P06400 SAR1AP4-201ENST00000429225 591 ntBASIC3.13□□□□□ -1.91
RB1P06400 AL358934.1-201ENST00000432346 324 ntBASIC3.13□□□□□ -1.91
RB1P06400 RPL23AP30-201ENST00000432419 501 ntBASIC3.13□□□□□ -1.91
RB1P06400 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.13□□□□□ -1.91
RB1P06400 C1DP4-201ENST00000455429 424 ntBASIC3.13□□□□□ -1.91
RB1P06400 RNU7-23P-201ENST00000459465 62 ntBASIC3.13□□□□□ -1.91
RB1P06400 AC108078.2-201ENST00000510750 236 ntBASIC3.13□□□□□ -1.91
RB1P06400 SNORA64.4-201ENST00000516632 81 ntBASIC3.13□□□□□ -1.91
RB1P06400 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
RB1P06400 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RB1P06400 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.13□□□□□ -1.91
RB1P06400 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.13□□□□□ -1.91
RB1P06400 AC024619.4-201ENST00000580924 316 ntBASIC3.13□□□□□ -1.91
RB1P06400 AC004852.3-201ENST00000614131 326 ntBASIC3.13□□□□□ -1.91
RB1P06400 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.13□□□□□ -1.91
RB1P06400 AC138649.3-201ENST00000622154 254 ntBASIC3.13□□□□□ -1.91
RB1P06400 AC068880.5-201ENST00000624331 290 ntBASIC3.13□□□□□ -1.91
RB1P06400 LRRC77P-213ENST00000637727 880 ntBASIC3.13□□□□□ -1.91
RB1P06400 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RB1P06400 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RB1P06400 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.13□□□□□ -1.91
RB1P06400 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RB1P06400 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RB1P06400 RNA5SP432-201ENST00000362480 116 ntBASIC3.12□□□□□ -1.91
RB1P06400 RNU6-1097P-201ENST00000363586 107 ntBASIC3.12□□□□□ -1.91
RB1P06400 Y_RNA.194-201ENST00000363985 102 ntBASIC3.12□□□□□ -1.91
RB1P06400 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RB1P06400 SNORA24.1-201ENST00000384401 135 ntBASIC3.12□□□□□ -1.91
RB1P06400 Y_RNA.534-201ENST00000384599 112 ntBASIC3.12□□□□□ -1.91
RB1P06400 Y_RNA.559-201ENST00000384686 107 ntBASIC3.12□□□□□ -1.91
RB1P06400 MIR196B-201ENST00000384852 84 ntBASIC3.12□□□□□ -1.91
RB1P06400 AL360182.1-201ENST00000397433 468 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC114491.1-201ENST00000416095 246 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.12□□□□□ -1.91
RB1P06400 HMGN2P30-201ENST00000423237 256 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.12□□□□□ -1.91
RB1P06400 MTATP6P16-201ENST00000434543 526 ntBASIC3.12□□□□□ -1.91
RB1P06400 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
RB1P06400 FABP5P13-201ENST00000452144 328 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.12□□□□□ -1.91
RB1P06400 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.12□□□□□ -1.91
RB1P06400 SNORD109B-201ENST00000458961 67 ntBASIC3.12□□□□□ -1.91
RB1P06400 SNORD109A-201ENST00000459128 67 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.12□□□□□ -1.91
RB1P06400 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.12□□□□□ -1.91
RB1P06400 RNU6-405P-201ENST00000516637 110 ntBASIC3.12□□□□□ -1.91
RB1P06400 RNU6-143P-201ENST00000516942 93 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.12□□□□□ -1.91
RB1P06400 AP001646.1-201ENST00000527936 915 ntBASIC3.12□□□□□ -1.91
RB1P06400 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.12□□□□□ -1.91
RB1P06400 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.12□□□□□ -1.91
RB1P06400 AL359212.1-201ENST00000556608 614 ntBASIC3.12□□□□□ -1.91
RB1P06400 MTCYBP33-201ENST00000575007 1130 ntBASIC3.12□□□□□ -1.91
RB1P06400 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
RB1P06400 DUSP12P1-201ENST00000612874 516 ntBASIC3.12□□□□□ -1.91
RB1P06400 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.12□□□□□ -1.91
RB1P06400 AC091564.4-201ENST00000533934 2194 ntBASIC3.12□□□□□ -1.91
RB1P06400 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RB1P06400 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RB1P06400 RNU6-181P-201ENST00000363225 107 ntBASIC3.11□□□□□ -1.91
RB1P06400 Y_RNA.367-201ENST00000365544 101 ntBASIC3.11□□□□□ -1.91
RB1P06400 Y_RNA.436-201ENST00000384097 102 ntBASIC3.11□□□□□ -1.91
RB1P06400 MIR9-1-201ENST00000385198 89 ntBASIC3.11□□□□□ -1.91
RB1P06400 Y_RNA.582-201ENST00000391023 95 ntBASIC3.11□□□□□ -1.91
RB1P06400 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.11□□□□□ -1.91
RB1P06400 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RB1P06400 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RB1P06400 AC080125.1-201ENST00000414888 684 ntBASIC3.11□□□□□ -1.91
RB1P06400 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.11□□□□□ -1.91
RB1P06400 SDCBPP3-201ENST00000419629 891 ntBASIC3.11□□□□□ -1.91
RB1P06400 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
RB1P06400 AC104332.2-201ENST00000429959 156 ntBASIC3.11□□□□□ -1.91
RB1P06400 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.11□□□□□ -1.91
RB1P06400 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.11□□□□□ -1.91
RB1P06400 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
RB1P06400 AC126389.1-201ENST00000477436 290 ntBASIC3.11□□□□□ -1.91
RB1P06400 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.11□□□□□ -1.91
RB1P06400 AC116562.3-201ENST00000506136 177 ntBASIC3.11□□□□□ -1.91
RB1P06400 AC114786.4-201ENST00000508771 728 ntBASIC3.11□□□□□ -1.91
RB1P06400 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
RB1P06400 MTCO3P7-201ENST00000510008 774 ntBASIC3.11□□□□□ -1.91
RB1P06400 RNA5SP385-201ENST00000515947 110 ntBASIC3.11□□□□□ -1.91
RB1P06400 RNA5SP217-201ENST00000515959 91 ntBASIC3.11□□□□□ -1.91
RB1P06400 Y_RNA.689-201ENST00000516589 107 ntBASIC3.11□□□□□ -1.91
RB1P06400 RNU6-914P-201ENST00000516749 109 ntBASIC3.11□□□□□ -1.91
RB1P06400 RNU6-445P-201ENST00000516949 107 ntBASIC3.11□□□□□ -1.91
RB1P06400 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
RB1P06400 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RB1P06400 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.11□□□□□ -1.91
RB1P06400 AC068587.5-201ENST00000528506 175 ntBASIC3.11□□□□□ -1.91
RB1P06400 MTND1P15-201ENST00000579262 949 ntBASIC3.11□□□□□ -1.91
RB1P06400 HMGN2P15-201ENST00000585707 270 ntBASIC3.11□□□□□ -1.91
RB1P06400 AC012409.4-201ENST00000612923 249 ntBASIC3.11□□□□□ -1.91
RB1P06400 AL512643.1-201ENST00000635735 524 ntBASIC3.11□□□□□ -1.91
RB1P06400 Z99571.1-201ENST00000636677 394 ntBASIC3.11□□□□□ -1.91
RB1P06400 U2.21-201ENST00000637295 81 ntBASIC3.11□□□□□ -1.91
RB1P06400 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RB1P06400 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms