Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC017071.1-201ENST00000564407 2204 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RNU6-960P-201ENST00000364056 120 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RNU6-946P-201ENST00000383878 107 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RNU6-629P-201ENST00000384061 103 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 MTCYBP4-201ENST00000401524 249 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 AL592114.1-201ENST00000403842 483 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RNU4-47P-201ENST00000410876 114 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 POLHP1-201ENST00000411806 470 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 AC063979.1-201ENST00000415539 377 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 RPL32P28-201ENST00000443577 397 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RPS15AP27-201ENST00000449183 343 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 AL162389.1-201ENST00000449233 177 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 Y_RNA.631-201ENST00000459607 101 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 KLHL2P1-201ENST00000508691 521 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RN7SKP24-201ENST00000515888 284 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RNU6-390P-201ENST00000516259 103 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 RNU6-566P-201ENST00000516790 107 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 Y_RNA.711-201ENST00000516993 102 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 COPS8P3-201ENST00000526024 482 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 HIGD1AP1-201ENST00000550979 275 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 OR11H5P-201ENST00000554039 926 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 AC022893.3-201ENST00000607665 437 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 AL139811.1-201ENST00000424779 2299 ntBASIC3.93□□□□□ -1.78
HLA-DOAP06340 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DOAP06340 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DOAP06340 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DOAP06340 TPTE2P4-201ENST00000258589 1605 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DOAP06340 DDX10P1-201ENST00000448545 1933 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 RNA5SP374-201ENST00000362939 125 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 SNORA23-201ENST00000365128 182 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 Y_RNA.445-201ENST00000384168 102 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 RNU6-1127P-201ENST00000384580 107 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 SNORA48.2-201ENST00000390926 124 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 RNU6-837P-201ENST00000391056 108 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 NDUFB4P4-201ENST00000404822 243 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DOAP06340 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 CALM2P2-201ENST00000428512 440 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AC090774.1-201ENST00000435925 246 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 MTCO3P45-201ENST00000443036 613 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 SCARNA18-201ENST00000459004 134 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 AL163540.1-201ENST00000485382 386 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 MTCO1P29-201ENST00000496868 288 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 RNU6-1046P-201ENST00000516538 107 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 RNU6-1213P-201ENST00000517075 94 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 AC004024.1-201ENST00000549244 247 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AL121603.1-201ENST00000553815 142 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DOAP06340 MIR4790-201ENST00000577799 79 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AC008162.1-201ENST00000604718 254 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AL670379.4-201ENST00000605279 254 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 ATP1B3P1-201ENST00000605365 821 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AL157817.1-201ENST00000614264 790 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 RMST_9.1-201ENST00000619945 193 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 AC244517.12-201ENST00000623581 663 ntBASIC3.92□□□□□ -1.78
HLA-DOAP06340 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 EXOC5P1-201ENST00000510543 1969 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC121333.1-201ENST00000567488 2709 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 RNU6-254P-201ENST00000363377 107 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 Y_RNA.146-201ENST00000363549 102 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DOAP06340 SNORA22B-201ENST00000383876 138 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 RNU6-1160P-201ENST00000384546 104 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 MIR124-3-201ENST00000384866 87 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 MIR128-1-201ENST00000384921 82 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 RNA5SP219-201ENST00000390940 113 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC096664.2-201ENST00000411843 406 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC092809.3-201ENST00000415453 231 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 SKA2P1-201ENST00000425592 390 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DOAP06340 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 AC107399.1-201ENST00000451226 265 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 MTCO3P10-201ENST00000455912 772 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 SNORD97-201ENST00000459187 142 ntBASIC3.91□□□□□ -1.78
HLA-DOAP06340 RPL21P8-201ENST00000465083 535 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms