Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC116618.1-201ENST00000634617 774 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AC099063.3-201ENST00000642066 185 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 AL359854.1-201ENST00000614203 1594 ntBASIC1.54□□□□□ -2.16
HLA-DQB2P05538 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 RNU6-486P-201ENST00000363116 107 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 RNU6-114P-201ENST00000384704 105 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 RNA5SP213-201ENST00000391031 106 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 MIR1304-201ENST00000408243 91 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 RNU6-516P-201ENST00000411381 104 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 PTGES3P1-201ENST00000439531 483 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 MTCYBP42-201ENST00000444653 1130 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 CECR9-201ENST00000453421 199 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC026801.1-201ENST00000497178 464 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 SNORA31.23-201ENST00000517219 133 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AP005435.4-201ENST00000529514 284 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 OR6C7P-201ENST00000547875 934 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 SNRPGP1-201ENST00000553864 222 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 DEFB122-202ENST00000569013 197 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AL138963.2-201ENST00000605137 226 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC025754.2-201ENST00000606491 432 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 AC079416.3-201ENST00000624479 549 ntBASIC1.53□□□□□ -2.16
HLA-DQB2P05538 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
HLA-DQB2P05538 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AL161781.1-201ENST00000354277 403 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 Y_RNA.245-201ENST00000364493 95 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 Y_RNA.408-201ENST00000383987 102 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 RNU6-1122P-201ENST00000384449 107 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 U8.14-201ENST00000390843 143 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 RPL7P27-201ENST00000403775 720 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 BTF3L4P3-201ENST00000418879 476 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AL161651.1-201ENST00000440882 223 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 RPL21P134-201ENST00000453468 483 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AC107032.1-201ENST00000485945 480 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 MRPS33P3-201ENST00000513456 322 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 RNA5SP112-201ENST00000515937 99 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 ROCK1P1-201ENST00000573767 549 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AC010928.2-201ENST00000588017 287 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AC078899.2-201ENST00000595282 212 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 BBIP1P1-201ENST00000602999 279 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AC068880.4-201ENST00000623082 495 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 AL079343.1-201ENST00000572358 1771 ntBASIC1.52□□□□□ -2.17
HLA-DQB2P05538 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HLA-DQB2P05538 RNU5B-4P-201ENST00000363508 111 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 MIR517C-201ENST00000385103 95 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AL603865.2-201ENST00000401679 213 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 SNORD56-201ENST00000413522 71 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 EDDM3CP-201ENST00000415977 425 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AL513185.2-201ENST00000425543 193 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC005410.1-202ENST00000460347 485 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC108210.2-201ENST00000503681 201 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC087897.1-201ENST00000550134 156 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC015712.3-201ENST00000559380 164 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 MIR4529-201ENST00000578110 78 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC104763.2-201ENST00000604179 382 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AL355297.2-201ENST00000604792 129 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC004908.2-201ENST00000609090 574 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC005296.1-201ENST00000616145 209 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 AC006927.2-201ENST00000639256 389 ntBASIC1.51□□□□□ -2.17
HLA-DQB2P05538 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms