Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 MIR6076-201ENST00000617521 113 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AL133216.2-202ENST00000634512 349 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 FAM35BP-202ENST00000497389 3337 ntBASIC3.16□□□□□ -1.9
HLA-DQA2P01906 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HLA-DQA2P01906 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQA2P01906 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HLA-DQA2P01906 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.15□□□□□ -1.9
HLA-DQA2P01906 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
HLA-DQA2P01906 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.15□□□□□ -1.9
HLA-DQA2P01906 AC138393.1-203ENST00000327086 343 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 SNORD81.2-201ENST00000365153 76 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 RNU6-1035P-201ENST00000384477 107 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 SNORA1.3-201ENST00000384676 136 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 MIR184-201ENST00000384962 84 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AL356057.2-201ENST00000403318 432 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 CYCSP33-201ENST00000414485 327 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC004975.1-201ENST00000428733 208 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 MYL8P-204ENST00000431574 518 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC005019.1-201ENST00000436455 431 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 CEACAMP4-201ENST00000457676 421 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 RPL7P43-201ENST00000478876 753 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC026784.1-201ENST00000507986 352 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 SNORA14.1-201ENST00000516113 141 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 RN7SKP256-201ENST00000517201 314 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 MIR4742-201ENST00000581069 85 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 MIR3609-201ENST00000582661 80 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC091135.1-201ENST00000585943 307 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AC021646.1-201ENST00000605469 484 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 RNU1-30P-201ENST00000606575 163 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AL357078.3-201ENST00000607528 618 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 AL731566.2-201ENST00000618971 317 ntBASIC3.15□□□□□ -1.91
HLA-DQA2P01906 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HLA-DQA2P01906 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AL359693.1-201ENST00000614959 2407 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 Y_RNA.100-201ENST00000363141 102 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 U3.12-201ENST00000364498 214 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RNU6-384P-201ENST00000364900 104 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RNU6-658P-201ENST00000384606 106 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RNU6-510P-201ENST00000391239 108 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 EIF4E2P1-201ENST00000393781 255 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 MIR450B-201ENST00000401182 78 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RNU2-3P-201ENST00000410144 191 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RN7SKP263-201ENST00000411194 309 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RPLP0P7-201ENST00000416050 667 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AL353621.1-201ENST00000418219 243 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 USP9YP20-201ENST00000419224 558 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 SKA2P1-201ENST00000425592 390 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC091390.1-201ENST00000433904 331 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AL357552.1-201ENST00000445254 415 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RPS3AP46-201ENST00000448352 682 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 PPP1R2P5-201ENST00000457256 603 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RNU7-66P-201ENST00000459469 62 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 RNU6-329P-201ENST00000459618 107 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 NDUFB4P9-201ENST00000511646 388 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC026402.1-201ENST00000513642 170 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 SNORA19.2-201ENST00000516013 114 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 SNORA70.19-201ENST00000516717 90 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC087241.2-201ENST00000535801 324 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 HIGD1AP1-201ENST00000550979 275 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 MTCO3P23-201ENST00000561363 289 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AMZ2P1-203ENST00000565833 850 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 MIR5692C1-201ENST00000585309 91 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 LARP7P1-201ENST00000605576 316 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 MIR6798-201ENST00000612887 67 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AL391261.4-201ENST00000616012 481 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.14□□□□□ -1.91
HLA-DQA2P01906 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 AC022149.2-201ENST00000621061 203 ntBASIC3.14□□□□□ -1.91
HLA-DQA2P01906 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms