Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN1O95832 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 AC103710.2-202ENST00000641454 2853 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 RNU5A-1-201ENST00000362698 116 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 SNORD56.3-201ENST00000363507 71 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU6-188P-201ENST00000364207 107 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU4-12P-201ENST00000365233 139 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 DYNLT3P1-201ENST00000378574 347 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 Y_RNA.402-201ENST00000383972 102 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU6-14P-201ENST00000384630 106 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 MIR1277-201ENST00000408536 78 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 MIR1290-201ENST00000408735 78 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 OR51A5P-201ENST00000415429 942 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RPL27AP8-201ENST00000424277 446 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN1O95832 MRPS10P2-201ENST00000431226 381 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC027673.1-201ENST00000456245 405 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RPS27P29-201ENST00000463110 252 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 MTCO3P38-201ENST00000468910 766 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RPL7P5-201ENST00000471472 736 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC116562.3-201ENST00000506136 177 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 MTND4LP22-201ENST00000508209 276 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC117522.1-201ENST00000509821 380 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC098591.2-201ENST00000510152 315 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU6-718P-201ENST00000516166 105 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU6-927P-201ENST00000516199 100 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNA5SP468-201ENST00000516782 93 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU6-835P-201ENST00000516974 104 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 RNU6-840P-201ENST00000517275 65 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC068587.5-201ENST00000528506 175 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 OR4R1P-201ENST00000529879 463 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.77□□□□□ -1.97
CLDN1O95832 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLDN1O95832 AL512360.1-201ENST00000555346 234 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.77□□□□□ -1.97
CLDN1O95832 AL355836.1-201ENST00000555951 870 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC092325.1-201ENST00000566449 554 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC104458.1-201ENST00000608243 463 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC093788.1-201ENST00000609356 927 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC007014.2-201ENST00000615581 479 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC090132.2-201ENST00000615881 347 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC099506.2-201ENST00000623074 221 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.77□□□□□ -1.97
CLDN1O95832 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CLDN1O95832 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CLDN1O95832 AC004972.1-201ENST00000623934 2209 ntBASIC2.77□□□□□ -1.97
CLDN1O95832 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CLDN1O95832 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CLDN1O95832 AC002546.1-201ENST00000588041 2504 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLDN1O95832 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN1O95832 RNU6-817P-201ENST00000391083 104 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 SNORD115-47-201ENST00000391226 86 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN1O95832 BTF3P7-201ENST00000407097 488 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 RNU6-908P-201ENST00000410160 94 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 RN7SKP140-201ENST00000411196 284 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AL513331.1-201ENST00000411908 397 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 HMGB3P11-201ENST00000440127 604 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AC016691.1-201ENST00000441321 413 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN1O95832 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN1O95832 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.76□□□□□ -1.97
CLDN1O95832 RNU6-261P-201ENST00000459506 102 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 RPS20P20-201ENST00000460498 340 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CLDN1O95832 UBL5P3-201ENST00000475112 231 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 RPS29P25-201ENST00000481709 171 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 MTAPP1-201ENST00000489154 819 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLDN1O95832 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 AL359273.1-201ENST00000510918 627 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AC114781.4-201ENST00000513707 639 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 RNU1-61P-201ENST00000516107 151 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 AC104027.1-201ENST00000521887 300 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 RPL23AP84-201ENST00000571193 464 ntBASIC2.76□□□□□ -1.97
CLDN1O95832 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.76□□□□□ -1.97
CLDN1O95832 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms