Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR3065-201ENST00000390137 79 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.96□□□□□ -1.78
CNOT4O95628 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.96□□□□□ -1.78
CNOT4O95628 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 PPP1R11P2-201ENST00000423543 382 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RPS12P10-201ENST00000427031 377 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RPL21P91-201ENST00000429231 479 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.96□□□□□ -1.78
CNOT4O95628 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.96□□□□□ -1.78
CNOT4O95628 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 RPL21P41-201ENST00000459863 264 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RN7SL812P-201ENST00000493791 279 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RPS27AP13-201ENST00000498403 237 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RNU6-408P-201ENST00000515910 100 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RNU6-1143P-201ENST00000516125 104 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 RN7SKP258-201ENST00000517151 304 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 MIR2116-201ENST00000517221 80 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.96□□□□□ -1.78
CNOT4O95628 RPL7P50-201ENST00000600588 727 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 AC091979.2-201ENST00000607514 214 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 SDR42E1P2-201ENST00000614861 481 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 XIST_intron.1-201ENST00000619444 68 ntBASIC3.96□□□□□ -1.78
CNOT4O95628 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CNOT4O95628 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.96□□□□□ -1.78
CNOT4O95628 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.96□□□□□ -1.78
CNOT4O95628 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.96□□□□□ -1.78
CNOT4O95628 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNOT4O95628 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT4O95628 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT4O95628 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.95□□□□□ -1.78
CNOT4O95628 MTND5P7-201ENST00000413558 1798 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 Y_RNA.288-201ENST00000364854 92 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 Y_RNA.447-201ENST00000384184 113 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 SNORA70C-201ENST00000384538 135 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 MIR1252-201ENST00000408861 65 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT4O95628 RPS15AP10-201ENST00000432472 382 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 RPL21P2-201ENST00000440049 481 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 DYNLT3P2-201ENST00000442517 295 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 FTH1P25-201ENST00000447665 469 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC010469.1-201ENST00000463864 576 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 HSPE1P6-201ENST00000479457 291 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 RPL21P129-201ENST00000491732 478 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC105758.1-201ENST00000506038 399 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.95□□□□□ -1.78
CNOT4O95628 SNORA31.3-201ENST00000516029 96 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 RNU2-53P-201ENST00000516257 147 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 SNORA70.16-201ENST00000516390 95 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 SNORA31.9-201ENST00000516429 84 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC007991.1-201ENST00000522680 631 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC104576.1-201ENST00000524225 88 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT4O95628 HSPE1P5-201ENST00000561489 272 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.95□□□□□ -1.78
CNOT4O95628 MIR5692A1-201ENST00000580523 69 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 AC016727.2-201ENST00000603988 621 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 ARF4P1-201ENST00000605447 541 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 SNX18P1Y-201ENST00000616231 511 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 ZYXP1-201ENST00000617638 118 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AL138825.1-201ENST00000618587 192 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 AC078938.1-201ENST00000620993 318 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC091905.2-201ENST00000623143 306 ntBASIC3.95□□□□□ -1.78
CNOT4O95628 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CNOT4O95628 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNOT4O95628 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.95□□□□□ -1.78
CNOT4O95628 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CNOT4O95628 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CNOT4O95628 AC002546.1-201ENST00000588041 2504 ntBASIC3.94□□□□□ -1.78
CNOT4O95628 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT4O95628 AL136164.4-201ENST00000625013 2135 ntBASIC3.94□□□□□ -1.78
CNOT4O95628 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT4O95628 RNU6-371P-201ENST00000364283 108 ntBASIC3.94□□□□□ -1.78
CNOT4O95628 SNORD14.1-201ENST00000365609 90 ntBASIC3.94□□□□□ -1.78
CNOT4O95628 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNOT4O95628 SNORA37-201ENST00000384504 129 ntBASIC3.94□□□□□ -1.78
CNOT4O95628 Y_RNA.552-201ENST00000384665 112 ntBASIC3.94□□□□□ -1.78
CNOT4O95628 MIR195-201ENST00000385194 87 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms