Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDN9O95484 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN9O95484 AL592045.1-201ENST00000429867 352 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN9O95484 MTND4P25-201ENST00000441039 533 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 RBM43P1-201ENST00000476891 1081 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 GTF2IP9-201ENST00000502460 301 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN9O95484 RNU6-703P-201ENST00000516946 107 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 SCARNA3-201ENST00000517097 143 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN9O95484 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN9O95484 AC010186.2-204ENST00000537668 439 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLDN9O95484 AC009097.3-201ENST00000563557 1018 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN9O95484 AC108747.1-201ENST00000609508 535 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 AC010678.1-201ENST00000614118 713 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 MIR7157-201ENST00000635801 60 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 U6.99-201ENST00000637524 83 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 MTND4P35-201ENST00000604257 1375 ntBASIC2.21□□□□□ -2.06
CLDN9O95484 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDN9O95484 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN9O95484 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN9O95484 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN9O95484 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 RNY4P24-201ENST00000362735 96 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 RNU6-288P-201ENST00000363690 104 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 Y_RNA.238-201ENST00000364441 102 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 RNU6-1200P-201ENST00000384162 107 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 MIR147B-201ENST00000390185 80 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 U3.37-201ENST00000408528 213 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AC007064.1-201ENST00000412238 351 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AF274854.1-201ENST00000413236 615 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 RAC1P6-201ENST00000423911 575 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 Z98742.2-201ENST00000431564 187 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN9O95484 AC034244.1-201ENST00000507687 207 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.2□□□□□ -2.06
CLDN9O95484 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.2□□□□□ -2.06
CLDN9O95484 AP001646.1-201ENST00000527936 915 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN9O95484 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.2□□□□□ -2.06
CLDN9O95484 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLDN9O95484 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN9O95484 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN9O95484 MIR3146-201ENST00000580367 79 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 MIR4765-201ENST00000585007 77 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AC091152.3-201ENST00000604227 325 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AC112187.2-201ENST00000604345 283 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AC007363.1-201ENST00000604736 620 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.2□□□□□ -2.06
CLDN9O95484 AC107214.2-201ENST00000608204 634 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AL391813.2-201ENST00000609113 322 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 TUSC7.1-201ENST00000610969 165 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AC022960.3-201ENST00000619794 441 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AL589994.2-201ENST00000621124 579 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 AP002782.1-201ENST00000623107 614 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN9O95484 PISRT1-201ENST00000626175 531 ntBASIC2.2□□□□□ -2.06
CLDN9O95484 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CLDN9O95484 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN9O95484 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CLDN9O95484 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN9O95484 RNU6-660P-201ENST00000364566 109 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 RNY3P13-201ENST00000365542 102 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN9O95484 RNU6-14P-201ENST00000384630 106 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 RNU6-19P-201ENST00000384718 107 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 AC107081.1-201ENST00000414975 361 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 PTGES3P4-201ENST00000426243 356 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 FABP5P14-201ENST00000437273 393 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN9O95484 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN9O95484 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN9O95484 AC026801.1-201ENST00000497178 464 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN9O95484 AC116347.2-201ENST00000514912 523 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 RNU6-143P-201ENST00000516942 93 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CLDN9O95484 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
CLDN9O95484 IGLV3-17-201ENST00000519099 244 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 MTCYBP20-201ENST00000524239 1129 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLDN9O95484 ROCK1P1-201ENST00000573767 549 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 AP001004.1-201ENST00000582468 324 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 AL358072.1-201ENST00000604156 575 ntBASIC2.19□□□□□ -2.06
CLDN9O95484 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.19□□□□□ -2.06
CLDN9O95484 AL449363.1-201ENST00000617815 186 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms