Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
LTN1O94822 HSBP1P2-201ENST00000299671 229 ntBASIC0.84□□□□□ -2.27
LTN1O94822 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
LTN1O94822 MIR493-201ENST00000385254 89 ntBASIC0.84□□□□□ -2.27
LTN1O94822 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.84□□□□□ -2.27
LTN1O94822 SNORA40.19-201ENST00000390846 128 ntBASIC0.84□□□□□ -2.27
LTN1O94822 USP9YP33-201ENST00000412220 421 ntBASIC0.84□□□□□ -2.27
LTN1O94822 USP9YP35-201ENST00000435696 412 ntBASIC0.84□□□□□ -2.27
LTN1O94822 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.84□□□□□ -2.27
LTN1O94822 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.84□□□□□ -2.27
LTN1O94822 RNA5SP395-201ENST00000516567 118 ntBASIC0.84□□□□□ -2.27
LTN1O94822 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.84□□□□□ -2.27
LTN1O94822 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.84□□□□□ -2.27
LTN1O94822 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.84□□□□□ -2.27
LTN1O94822 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.84□□□□□ -2.27
LTN1O94822 AL136372.1-201ENST00000403060 228 ntBASIC0.83□□□□□ -2.28
LTN1O94822 AC099677.1-201ENST00000420575 175 ntBASIC0.83□□□□□ -2.28
LTN1O94822 RNU11-2P-201ENST00000516898 142 ntBASIC0.83□□□□□ -2.28
LTN1O94822 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.83□□□□□ -2.28
LTN1O94822 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.83□□□□□ -2.28
LTN1O94822 AC025588.2-201ENST00000604851 466 ntBASIC0.83□□□□□ -2.28
LTN1O94822 AC015849.6-201ENST00000605454 474 ntBASIC0.83□□□□□ -2.28
LTN1O94822 AC006270.3-201ENST00000605967 1036 ntBASIC0.83□□□□□ -2.28
LTN1O94822 AC012213.4-201ENST00000606457 354 ntBASIC0.83□□□□□ -2.28
LTN1O94822 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LTN1O94822 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LTN1O94822 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.83□□□□□ -2.28
LTN1O94822 MTCYBP3-201ENST00000445588 1137 ntBASIC0.83□□□□□ -2.28
LTN1O94822 PTENP1-201ENST00000447117 1215 ntBASIC0.83□□□□□ -2.28
LTN1O94822 DYNLL1P5-201ENST00000467158 270 ntBASIC0.83□□□□□ -2.28
LTN1O94822 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.83□□□□□ -2.28
LTN1O94822 AC022447.1-201ENST00000515358 464 ntBASIC0.83□□□□□ -2.28
LTN1O94822 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.83□□□□□ -2.28
LTN1O94822 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.83□□□□□ -2.28
LTN1O94822 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
LTN1O94822 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.82□□□□□ -2.28
LTN1O94822 AC073544.1-201ENST00000600110 1595 ntBASIC0.82□□□□□ -2.28
LTN1O94822 U3.13-201ENST00000364804 214 ntBASIC0.82□□□□□ -2.28
LTN1O94822 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LTN1O94822 RNU4-78P-201ENST00000410940 126 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AC012497.1-201ENST00000429392 575 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AC092628.1-201ENST00000436250 252 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AL714022.1-201ENST00000439897 151 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.82□□□□□ -2.28
LTN1O94822 AL590365.1-201ENST00000450788 243 ntBASIC0.82□□□□□ -2.28
LTN1O94822 RPL23AP35-201ENST00000451906 501 ntBASIC0.82□□□□□ -2.28
LTN1O94822 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AC116337.2-201ENST00000477662 156 ntBASIC0.82□□□□□ -2.28
LTN1O94822 SCARNA11.3-201ENST00000517276 130 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.82□□□□□ -2.28
LTN1O94822 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.82□□□□□ -2.28
LTN1O94822 AC074051.3-201ENST00000570238 358 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AP003400.5-201ENST00000624827 617 ntBASIC0.82□□□□□ -2.28
LTN1O94822 AC092192.1-201ENST00000633154 1018 ntBASIC0.82□□□□□ -2.28
LTN1O94822 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
LTN1O94822 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LTN1O94822 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.81□□□□□ -2.28
LTN1O94822 OFD1P18Y-201ENST00000420889 959 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AL109913.1-201ENST00000421173 514 ntBASIC0.81□□□□□ -2.28
LTN1O94822 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.81□□□□□ -2.28
LTN1O94822 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AC107626.1-201ENST00000471084 183 ntBASIC0.81□□□□□ -2.28
LTN1O94822 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.81□□□□□ -2.28
LTN1O94822 AK3P2-201ENST00000507976 429 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AC067942.3-201ENST00000512025 362 ntBASIC0.81□□□□□ -2.28
LTN1O94822 RNU5F-8P-201ENST00000515941 111 ntBASIC0.81□□□□□ -2.28
LTN1O94822 MED28P6-201ENST00000558776 231 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AC138473.1-201ENST00000605717 526 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AC068276.1-201ENST00000605793 379 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AL355802.3-201ENST00000607571 545 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AL590410.1-201ENST00000617925 333 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AL136313.1-201ENST00000624804 202 ntBASIC0.81□□□□□ -2.28
LTN1O94822 AP000776.1-201ENST00000530032 1663 ntBASIC0.81□□□□□ -2.28
LTN1O94822 TPTE2P4-201ENST00000258589 1605 ntBASIC0.81□□□□□ -2.28
LTN1O94822 RNA5SP347-201ENST00000362445 119 ntBASIC0.8□□□□□ -2.28
LTN1O94822 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.8□□□□□ -2.28
LTN1O94822 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.8□□□□□ -2.28
LTN1O94822 C1DP3-201ENST00000455013 423 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AC022254.1-201ENST00000567857 235 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.8□□□□□ -2.28
LTN1O94822 AC243829.3-201ENST00000622177 108 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AC091925.2-201ENST00000625059 256 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AP003399.1-201ENST00000637534 361 ntBASIC0.8□□□□□ -2.28
LTN1O94822 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.8□□□□□ -2.28
LTN1O94822 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.8□□□□□ -2.28
LTN1O94822 RNU6-1293P-201ENST00000384077 107 ntBASIC0.8□□□□□ -2.28
LTN1O94822 RNA5SP511-201ENST00000410487 115 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.8□□□□□ -2.28
LTN1O94822 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.8□□□□□ -2.28
LTN1O94822 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.8□□□□□ -2.28
LTN1O94822 ZNF965P-201ENST00000432501 817 ntBASIC0.8□□□□□ -2.28
LTN1O94822 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.8□□□□□ -2.28
LTN1O94822 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.8□□□□□ -2.28
LTN1O94822 MTND4LP3-201ENST00000468320 276 ntBASIC0.8□□□□□ -2.28
LTN1O94822 SNORA48.10-201ENST00000516965 160 ntBASIC0.8□□□□□ -2.28
LTN1O94822 AP003497.1-201ENST00000528472 562 ntBASIC0.8□□□□□ -2.28
LTN1O94822 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.8□□□□□ -2.28
LTN1O94822 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.8□□□□□ -2.28
LTN1O94822 DUXAP10-204ENST00000612052 616 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms