Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR5684-201ENST00000585074 65 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD1O75127 AC098826.3-201ENST00000603823 466 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 AL591516.1-201ENST00000611326 274 ntBASIC5.27□□□□□ -1.57
PTCD1O75127 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD1O75127 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD1O75127 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTCD1O75127 AC093535.2-201ENST00000624769 2326 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 AC093591.2-201ENST00000565254 3843 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 RNA5SP52-201ENST00000362448 134 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 Y_RNA.64-201ENST00000362845 102 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 Y_RNA.152-201ENST00000363578 100 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 Y_RNA.214-201ENST00000364201 112 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 Y_RNA.333-201ENST00000365274 102 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 RNU6-629P-201ENST00000384061 103 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 MIR30B-201ENST00000384850 88 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 PCNPP3-201ENST00000393579 471 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 SNORA11.1-201ENST00000408133 129 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 MIR1302-6-201ENST00000408466 90 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 MIR1252-201ENST00000408861 65 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 DAP3P1-201ENST00000441522 278 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 ABCF2P2-201ENST00000450549 296 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 AC087588.1-201ENST00000462203 316 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 AC113155.1-201ENST00000511141 769 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 RNU1-86P-201ENST00000516108 154 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 RNU1-107P-201ENST00000516617 154 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 SNORA81.3-201ENST00000517283 198 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 IGKV2D-23-201ENST00000518179 286 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 AC007991.1-201ENST00000522680 631 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCD1O75127 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.26□□□□□ -1.57
PTCD1O75127 AC069200.1-201ENST00000609511 323 ntBASIC5.26□□□□□ -1.57
PTCD1O75127 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.26□□□□□ -1.57
PTCD1O75127 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD1O75127 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD1O75127 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD1O75127 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTCD1O75127 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.26□□□□□ -1.57
PTCD1O75127 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 AC125336.1-201ENST00000508893 2827 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 ZNF72P-201ENST00000425869 1908 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 SDAD1P2-201ENST00000441308 2028 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PTCD1O75127 RNU6-1167P-201ENST00000363227 94 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 SNORD46.1-201ENST00000364139 104 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 MIR449B-201ENST00000384995 97 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 MIR514A1-201ENST00000385133 98 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 RNU6-1093P-201ENST00000391194 107 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 RNU6-325P-201ENST00000411132 105 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 CRYBB2P1-203ENST00000415709 538 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCD1O75127 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 AL358472.1-201ENST00000431295 329 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCD1O75127 AC104332.1-201ENST00000440471 797 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 RPL39P38-201ENST00000467018 153 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 RPS23P3-201ENST00000470993 430 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 RPL7P5-201ENST00000471472 736 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AC069499.1-201ENST00000489433 509 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AC022493.1-201ENST00000492984 337 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCD1O75127 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCD1O75127 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCD1O75127 Y_RNA.715-201ENST00000517082 110 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 SNORA31.20-201ENST00000517111 133 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AC022616.4-201ENST00000522985 181 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AP004371.1-201ENST00000525240 214 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 HSPE1P20-201ENST00000538133 289 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.25□□□□□ -1.57
PTCD1O75127 AL157871.3-201ENST00000557231 293 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 MIR1273C-201ENST00000578669 77 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 MIR4472-2-201ENST00000582069 67 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AC008739.3-201ENST00000603262 127 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 MTND4LP5-201ENST00000605152 292 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AC123912.5-201ENST00000605470 343 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 MIR3976-201ENST00000606807 139 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.25□□□□□ -1.57
PTCD1O75127 FP236240.3-201ENST00000623061 327 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 AL592182.3-201ENST00000642132 3304 ntBASIC5.25□□□□□ -1.57
PTCD1O75127 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.25□□□□□ -1.57
PTCD1O75127 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTCD1O75127 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PTCD1O75127 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCD1O75127 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.24□□□□□ -1.57
PTCD1O75127 RNA5SP22-201ENST00000365393 109 ntBASIC5.24□□□□□ -1.57
PTCD1O75127 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PTCD1O75127 MIR1271-201ENST00000408537 86 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms