Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SNORA4.1-201ENST00000364263 144 ntBASIC1.89□□□□□ -2.11
CTNSO60931 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
CTNSO60931 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.89□□□□□ -2.11
CTNSO60931 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNSO60931 RNU6-658P-201ENST00000384606 106 ntBASIC1.89□□□□□ -2.11
CTNSO60931 CIR1P3-201ENST00000405137 479 ntBASIC1.89□□□□□ -2.11
CTNSO60931 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
CTNSO60931 MIR1305-201ENST00000408300 86 ntBASIC1.89□□□□□ -2.11
CTNSO60931 RNU2-2P-201ENST00000410396 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
CTNSO60931 CYCSP48-201ENST00000417124 323 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
CTNSO60931 ISCA1P1-201ENST00000426679 387 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.89□□□□□ -2.11
CTNSO60931 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
CTNSO60931 AL117351.1-201ENST00000438864 766 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AL161651.1-201ENST00000440882 223 ntBASIC1.89□□□□□ -2.11
CTNSO60931 RPL23AP7-203ENST00000449021 469 ntBASIC1.89□□□□□ -2.11
CTNSO60931 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CTNSO60931 AL021397.1-201ENST00000451806 248 ntBASIC1.89□□□□□ -2.11
CTNSO60931 FABP5P15-201ENST00000453566 214 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNSO60931 AC080013.2-201ENST00000460866 323 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.89□□□□□ -2.11
CTNSO60931 AC092436.1-201ENST00000506450 503 ntBASIC1.89□□□□□ -2.11
CTNSO60931 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNSO60931 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.89□□□□□ -2.11
CTNSO60931 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNSO60931 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.89□□□□□ -2.11
CTNSO60931 MIR4765-201ENST00000585007 77 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC005261.5-201ENST00000596280 355 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC008749.1-201ENST00000597650 306 ntBASIC1.89□□□□□ -2.11
CTNSO60931 RPP40P2-201ENST00000603596 712 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AL450336.1-201ENST00000605180 586 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AL592221.1-201ENST00000605266 382 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC072039.2-201ENST00000608883 439 ntBASIC1.89□□□□□ -2.11
CTNSO60931 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.89□□□□□ -2.11
CTNSO60931 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 uc_338.14-201ENST00000613162 166 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
CTNSO60931 AC025048.6-202ENST00000627667 438 ntBASIC1.89□□□□□ -2.11
CTNSO60931 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CTNSO60931 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CTNSO60931 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CTNSO60931 HSPE1P11-201ENST00000339579 310 ntBASIC1.88□□□□□ -2.11
CTNSO60931 RNU6-512P-201ENST00000364438 103 ntBASIC1.88□□□□□ -2.11
CTNSO60931 MIR147B-201ENST00000390185 80 ntBASIC1.88□□□□□ -2.11
CTNSO60931 RNU6-278P-201ENST00000390945 109 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AL079342.1-201ENST00000401460 267 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AL139397.2-201ENST00000404529 772 ntBASIC1.88□□□□□ -2.11
CTNSO60931 RNU4-26P-201ENST00000410270 107 ntBASIC1.88□□□□□ -2.11
CTNSO60931 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.88□□□□□ -2.11
CTNSO60931 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.88□□□□□ -2.11
CTNSO60931 AL109913.1-201ENST00000421173 514 ntBASIC1.88□□□□□ -2.11
CTNSO60931 BX276092.3-201ENST00000424182 230 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.88□□□□□ -2.11
CTNSO60931 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 FABP5P14-201ENST00000437273 393 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.88□□□□□ -2.11
CTNSO60931 USP9YP8-201ENST00000441913 500 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.88□□□□□ -2.11
CTNSO60931 EXOSC3P1-201ENST00000448649 500 ntBASIC1.88□□□□□ -2.11
CTNSO60931 MTATP6P14-201ENST00000455189 673 ntBASIC1.88□□□□□ -2.11
CTNSO60931 RPL38P4-201ENST00000502376 214 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CTNSO60931 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.88□□□□□ -2.11
CTNSO60931 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
CTNSO60931 RNU6-64P-201ENST00000517119 105 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.88□□□□□ -2.11
CTNSO60931 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
CTNSO60931 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.88□□□□□ -2.11
CTNSO60931 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC105245.1-201ENST00000581934 244 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 AC078899.2-201ENST00000595282 212 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AL391001.1-201ENST00000602747 715 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC025165.5-201ENST00000602802 578 ntBASIC1.88□□□□□ -2.11
CTNSO60931 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CTNSO60931 AC080013.3-201ENST00000606839 578 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC087241.4-201ENST00000612441 480 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC012150.2-201ENST00000621300 544 ntBASIC1.88□□□□□ -2.11
CTNSO60931 AC110994.2-201ENST00000635481 492 ntBASIC1.88□□□□□ -2.11
CTNSO60931 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CTNSO60931 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms