Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNVU1-3-201ENST00000364313 161 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 MIR607-201ENST00000385241 96 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 MTCO3P40-201ENST00000392516 676 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 MRPL42P2-201ENST00000403169 426 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 NUP35P2-201ENST00000416748 943 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 OR51AB1P-201ENST00000429046 620 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 MTND4LP16-201ENST00000440828 295 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC093019.1-201ENST00000443135 252 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.98□□□□□ -1.93
CACNA1FO60840 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.98□□□□□ -1.93
CACNA1FO60840 RNA5SP468-201ENST00000516782 93 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC104986.1-201ENST00000517978 436 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.98□□□□□ -1.93
CACNA1FO60840 AC021269.2-201ENST00000532318 330 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CACNA1FO60840 AC121334.2-201ENST00000605387 271 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AL161734.1-201ENST00000609720 557 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 XIST_intron.1-201ENST00000619444 68 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AL445264.1-201ENST00000621719 171 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC022140.2-201ENST00000623500 188 ntBASIC2.98□□□□□ -1.93
CACNA1FO60840 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CACNA1FO60840 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CACNA1FO60840 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CACNA1FO60840 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.97□□□□□ -1.93
CACNA1FO60840 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CACNA1FO60840 DYNLT3P1-201ENST00000378574 347 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 RNU6-533P-201ENST00000384144 107 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AL354719.1-201ENST00000406535 843 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 HMGB1P11-201ENST00000413899 637 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.97□□□□□ -1.93
CACNA1FO60840 ISCA1P6-201ENST00000427740 390 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 PSMA2P3-201ENST00000429685 675 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.97□□□□□ -1.93
CACNA1FO60840 AL358934.1-201ENST00000432346 324 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 MTCYBP45-201ENST00000435243 565 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 HMGB3P12-201ENST00000438745 556 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.97□□□□□ -1.93
CACNA1FO60840 AC002381.1-201ENST00000447049 280 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.97□□□□□ -1.93
CACNA1FO60840 AC022364.2-201ENST00000457963 554 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 Y_RNA.672-201ENST00000516289 104 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AP003467.2-201ENST00000520175 319 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.97□□□□□ -1.93
CACNA1FO60840 AC105137.2-201ENST00000569073 466 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 MIR3690-201ENST00000580266 75 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.97□□□□□ -1.93
CACNA1FO60840 MIR3670-2-201ENST00000582974 65 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 MIR3670-1-201ENST00000584160 65 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 MAGOH2P-202ENST00000584384 429 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 MIR3670-3-201ENST00000584855 65 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 AC067747.1-201ENST00000608026 250 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.97□□□□□ -1.93
CACNA1FO60840 MIR3670-4-201ENST00000612260 65 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CACNA1FO60840 AC099654.5-201ENST00000636479 350 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CACNA1FO60840 ZNF658B-202ENST00000615961 3375 ntBASIC2.97□□□□□ -1.93
CACNA1FO60840 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.96□□□□□ -1.94
CACNA1FO60840 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CACNA1FO60840 RNU6-1085P-201ENST00000363576 107 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RNU6-744P-201ENST00000365557 107 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RNU6-1316P-201ENST00000384242 108 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RPL23AP32-201ENST00000395315 459 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 DHFRP6-201ENST00000401776 268 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 BTBD10P2-201ENST00000404779 676 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 GSTA9P-201ENST00000406231 611 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AL023807.1-201ENST00000407932 359 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC078974.1-201ENST00000411597 223 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC127391.1-201ENST00000411737 98 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.96□□□□□ -1.94
CACNA1FO60840 DPH3P2-201ENST00000422618 250 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 ARF4P2-201ENST00000430209 526 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RPL36P19-201ENST00000430744 301 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 MYL8P-204ENST00000431574 518 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 RPL21P112-201ENST00000434403 463 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 BX276092.4-201ENST00000452056 248 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RNU7-59P-201ENST00000459101 61 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 RPL39P36-201ENST00000490784 156 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AC034222.1-201ENST00000494052 532 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC112204.1-201ENST00000502591 103 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 Y_RNA.704-201ENST00000516851 102 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 MIR4435-1-201ENST00000582552 80 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AP001350.1-201ENST00000601906 1524 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC099778.2-201ENST00000610904 211 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.96□□□□□ -1.94
CACNA1FO60840 AL133173.2-201ENST00000614270 90 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 AC009161.2-201ENST00000624626 138 ntBASIC2.96□□□□□ -1.94
CACNA1FO60840 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms