Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC083904.1-201ENST00000487828 231 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMX1BO60663 AC108078.2-201ENST00000510750 236 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AP006587.4-201ENST00000526053 529 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL137161.1-201ENST00000532231 390 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.97□□□□□ -1.93
LMX1BO60663 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.97□□□□□ -1.93
LMX1BO60663 AC022432.1-201ENST00000595739 310 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC243960.4-201ENST00000600532 288 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL670379.11-201ENST00000604059 253 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL670379.10-201ENST00000604330 253 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC113139.1-201ENST00000605049 239 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL670379.12-201ENST00000605291 253 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL670379.9-201ENST00000605428 253 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC092807.2-201ENST00000609367 243 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 uc_338.34-201ENST00000617467 174 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 uc_338.11-201ENST00000619132 160 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AL160413.1-201ENST00000622780 310 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AC110801.1-201ENST00000623590 212 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMX1BO60663 PWAR6-201ENST00000552334 4618 ntBASIC2.97□□□□□ -1.93
LMX1BO60663 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LMX1BO60663 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
LMX1BO60663 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
LMX1BO60663 AC121333.1-201ENST00000567488 2709 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMX1BO60663 DDX10P1-201ENST00000448545 1933 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMX1BO60663 Y_RNA.339-201ENST00000365325 102 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 Y_RNA.373-201ENST00000365600 103 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RNU6-1227P-201ENST00000383981 107 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RNU6-701P-201ENST00000384059 107 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RNU6-629P-201ENST00000384061 103 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC110754.1-201ENST00000399740 601 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 TXNP7-201ENST00000406296 293 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC126124.2-201ENST00000413542 321 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AL451054.2-201ENST00000420896 202 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RPL21P112-201ENST00000434403 463 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RPS3AP52-201ENST00000435639 297 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.96□□□□□ -1.94
LMX1BO60663 AC004866.2-201ENST00000438285 481 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 TXNP1-201ENST00000441872 371 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC234775.1-201ENST00000454247 670 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 SNRPFP3-201ENST00000457792 225 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC025518.1-201ENST00000479856 347 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AL049830.2-201ENST00000480072 201 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.96□□□□□ -1.94
LMX1BO60663 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.96□□□□□ -1.94
LMX1BO60663 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.96□□□□□ -1.94
LMX1BO60663 AC104806.1-201ENST00000508720 308 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.96□□□□□ -1.94
LMX1BO60663 RNU6-864P-201ENST00000516256 108 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RNU1-103P-201ENST00000516502 125 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 RNU6-1088P-201ENST00000516850 104 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC107934.2-201ENST00000518653 310 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.96□□□□□ -1.94
LMX1BO60663 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
LMX1BO60663 AC018630.1-201ENST00000541376 925 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.96□□□□□ -1.94
LMX1BO60663 MIR3942-201ENST00000585264 109 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 AL022099.1-201ENST00000604551 712 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 MIR8057-201ENST00000620957 69 ntBASIC2.96□□□□□ -1.94
LMX1BO60663 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
LMX1BO60663 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.96□□□□□ -1.94
LMX1BO60663 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LMX1BO60663 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LMX1BO60663 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
LMX1BO60663 AL133383.2-201ENST00000622958 2336 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 TPTE2P4-201ENST00000258589 1605 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 RNU4-35P-201ENST00000362588 141 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 Y_RNA.138-201ENST00000363462 102 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 RNU6-356P-201ENST00000384140 107 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 RNU6-1127P-201ENST00000384580 107 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 RNU6-882P-201ENST00000391025 103 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AL139397.2-201ENST00000404529 772 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.95□□□□□ -1.94
LMX1BO60663 RNU2-43P-201ENST00000410306 190 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 RNA5SP31-201ENST00000411144 127 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 OR6C66P-201ENST00000414917 930 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AL137014.1-201ENST00000420490 1226 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AF228730.4-201ENST00000421457 183 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 RAC1P6-201ENST00000423911 575 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.95□□□□□ -1.94
LMX1BO60663 AC115115.1-201ENST00000449927 248 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 AL136097.1-201ENST00000456945 913 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 HMGN1P18-201ENST00000457642 277 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 Y_RNA.632-201ENST00000459189 102 ntBASIC2.95□□□□□ -1.94
LMX1BO60663 MTND4P17-201ENST00000470444 350 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms