Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA12O60330 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA12O60330 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 RNU6-266P-201ENST00000364225 107 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AL356432.1-201ENST00000405809 419 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 Y_RNA.623-201ENST00000411128 95 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 NDUFB4P5-201ENST00000415445 361 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AL139396.1-201ENST00000421137 167 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AL139247.1-201ENST00000422768 325 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC098614.2-201ENST00000426040 255 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 MYL8P-204ENST00000431574 518 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 HMGN2P31-201ENST00000432430 273 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 RNU7-66P-201ENST00000459469 62 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC006445.2-201ENST00000510061 472 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 RNU6-256P-201ENST00000516747 97 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 CTHRC1P1-201ENST00000605383 469 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC021646.1-201ENST00000605469 484 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC128687.2-201ENST00000609657 566 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC104237.2-201ENST00000612456 443 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC091953.5-201ENST00000622919 233 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 AC073346.2-201ENST00000624724 2058 ntBASIC3.83□□□□□ -1.8
PCDHGA12O60330 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PCDHGA12O60330 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA12O60330 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA12O60330 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 MTND5P7-201ENST00000413558 1798 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 SNORD6-201ENST00000365444 73 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 Y_RNA.356-201ENST00000365475 113 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 RNU6-214P-201ENST00000384130 107 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 MIR183-201ENST00000384958 110 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 SNORA40C-201ENST00000391285 128 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 MIR1251-201ENST00000408552 70 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 NDUFS5P4-201ENST00000412983 318 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 RPL21P109-201ENST00000422213 475 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 HMGB1P9-201ENST00000429856 646 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 SNAP23P1-201ENST00000433229 246 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 HMGB1P18-201ENST00000438801 619 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AL078601.1-201ENST00000444542 271 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 RANP8-201ENST00000444720 713 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 RNU7-138P-201ENST00000459479 64 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC011005.2-201ENST00000487324 359 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 SCARNA14-201ENST00000516903 136 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 RNU6-703P-201ENST00000516946 107 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 SNORA31.19-201ENST00000517079 126 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC009902.1-201ENST00000519351 183 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 RAB11AP2-201ENST00000545905 639 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC026464.5-201ENST00000562497 722 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 MIR5692C1-201ENST00000585309 91 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AL117336.2-201ENST00000602435 335 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AC087045.1-201ENST00000605856 382 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 AL773545.4-201ENST00000637262 310 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 AL513478.4-201ENST00000641636 310 ntBASIC3.82□□□□□ -1.8
PCDHGA12O60330 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA12O60330 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA12O60330 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA12O60330 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA12O60330 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA12O60330 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA12O60330 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHGA12O60330 AC066616.2-201ENST00000559334 1481 ntBASIC3.81□□□□□ -1.8
PCDHGA12O60330 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
PCDHGA12O60330 Y_RNA.301-201ENST00000364990 103 ntBASIC3.81□□□□□ -1.8
PCDHGA12O60330 Y_RNA.324-201ENST00000365165 102 ntBASIC3.81□□□□□ -1.8
PCDHGA12O60330 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms