Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP2AO43633 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP2AO43633 RNU6-432P-201ENST00000384196 109 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 Y_RNA.465-201ENST00000384293 102 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CHMP2AO43633 AC119751.3-201ENST00000399720 670 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AL590084.2-201ENST00000401481 382 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 CCNG1P1-201ENST00000406783 885 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 RN7SKP158-201ENST00000410453 326 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 RNU6-1140P-201ENST00000410517 106 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 RPL17P12-201ENST00000413391 526 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 MTATP6P20-201ENST00000414147 562 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.09□□□□□ -2.07
CHMP2AO43633 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.09□□□□□ -2.07
CHMP2AO43633 AC092648.1-201ENST00000425870 423 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AL591806.2-201ENST00000433122 173 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 MTCO2P25-201ENST00000447065 681 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 PTENP1-201ENST00000447117 1215 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 TPT1P14-201ENST00000448018 505 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 RPL23AP42-201ENST00000471152 471 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AC091951.3-201ENST00000504093 246 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 HSPE1P23-201ENST00000509838 286 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP2AO43633 MTCYBP43-201ENST00000513621 740 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 RNA5SP165-201ENST00000517142 115 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 HMGN1P28-201ENST00000521340 364 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP2AO43633 AL353997.4-201ENST00000586196 166 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 APOOP1-201ENST00000604695 592 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 AC009974.1-201ENST00000608881 455 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP2AO43633 AL445984.1-201ENST00000637834 659 ntBASIC2.09□□□□□ -2.07
CHMP2AO43633 MTND4P9-201ENST00000507819 1346 ntBASIC2.09□□□□□ -2.08
CHMP2AO43633 AC011477.1-204ENST00000623416 1325 ntBASIC2.09□□□□□ -2.08
CHMP2AO43633 ZNF355P-201ENST00000427301 3216 ntBASIC2.09□□□□□ -2.08
CHMP2AO43633 ADAM3A-203ENST00000461344 2157 ntBASIC2.09□□□□□ -2.08
CHMP2AO43633 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
CHMP2AO43633 MTND4P1-201ENST00000457501 1466 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHMP2AO43633 RNU6-853P-201ENST00000364306 107 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 SNORA46.1-201ENST00000391069 153 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 RNU2-40P-201ENST00000410833 196 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.08□□□□□ -2.08
CHMP2AO43633 UBE2FP3-201ENST00000436366 524 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.08□□□□□ -2.08
CHMP2AO43633 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP2AO43633 PSPHP1-201ENST00000450062 261 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 snoU109.3-201ENST00000459477 145 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC080013.2-201ENST00000460866 323 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
CHMP2AO43633 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.08□□□□□ -2.08
CHMP2AO43633 FAM92A1P2-202ENST00000504766 877 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP2AO43633 SNORA25.11-201ENST00000515935 105 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC023538.1-201ENST00000534576 736 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 NACAP3-201ENST00000552100 481 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC021739.1-201ENST00000559631 174 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.08□□□□□ -2.08
CHMP2AO43633 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHMP2AO43633 AC008749.1-201ENST00000597650 306 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 DPPA3P3-201ENST00000603842 430 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC112204.3-201ENST00000623822 332 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP2AO43633 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP2AO43633 AC099654.9-201ENST00000637055 678 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 HSPA8P4-201ENST00000511877 1920 ntBASIC2.08□□□□□ -2.08
CHMP2AO43633 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CHMP2AO43633 AL390862.1-201ENST00000635467 1469 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CHMP2AO43633 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.07□□□□□ -2.08
CHMP2AO43633 RNU4-68P-201ENST00000364314 141 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 MIR9-3-201ENST00000385084 90 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP2AO43633 RPS3AP44-201ENST00000425466 790 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 MTCO1P27-201ENST00000448269 226 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AP000542.1-201ENST00000448473 371 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 MTND1P9-201ENST00000453775 944 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AC010587.2-201ENST00000511727 448 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.07□□□□□ -2.08
CHMP2AO43633 MTND5P13-201ENST00000513046 1079 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AC006199.1-201ENST00000548728 219 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP2AO43633 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP2AO43633 TMF1P1-201ENST00000576058 373 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 MIR3124-201ENST00000582636 67 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP2AO43633 AL133445.2-201ENST00000611191 527 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AL139418.1-201ENST00000613613 177 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 AL162373.1-201ENST00000620433 407 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 MTND5P30-201ENST00000452896 1731 ntBASIC2.07□□□□□ -2.08
CHMP2AO43633 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.06□□□□□ -2.08
CHMP2AO43633 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHMP2AO43633 AP000776.1-201ENST00000530032 1663 ntBASIC2.06□□□□□ -2.08
CHMP2AO43633 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms