Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC116165.2-201ENST00000616705 206 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC068137.3-201ENST00000639191 341 ntBASIC2.52□□□□□ -2.01
CDX4O14627 AC073869.6-201ENST00000640656 341 ntBASIC2.52□□□□□ -2.01
CDX4O14627 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDX4O14627 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDX4O14627 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDX4O14627 AC108206.1-201ENST00000570186 4159 ntBASIC2.52□□□□□ -2.01
CDX4O14627 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDX4O14627 AC103988.1-201ENST00000566382 2177 ntBASIC2.51□□□□□ -2.01
CDX4O14627 OR4G2P-202ENST00000641004 1759 ntBASIC2.51□□□□□ -2.01
CDX4O14627 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CDX4O14627 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDX4O14627 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDX4O14627 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDX4O14627 RNA5SP252-201ENST00000391131 119 ntBASIC2.51□□□□□ -2.01
CDX4O14627 CCNG1P1-201ENST00000406783 885 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC078974.1-201ENST00000411597 223 ntBASIC2.51□□□□□ -2.01
CDX4O14627 DPH3P2-201ENST00000422618 250 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC012498.1-201ENST00000424037 437 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 OR2AS1P-201ENST00000427827 319 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AL356320.1-201ENST00000429616 163 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 HMGN2P3-201ENST00000433603 273 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 TAAR7P-201ENST00000436141 242 ntBASIC2.51□□□□□ -2.01
CDX4O14627 HMGN2P5-201ENST00000436882 273 ntBASIC2.51□□□□□ -2.01
CDX4O14627 RPL23AP22-201ENST00000437556 453 ntBASIC2.51□□□□□ -2.01
CDX4O14627 PGBD4P3-201ENST00000440731 581 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX4O14627 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX4O14627 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX4O14627 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 snoU109.1-201ENST00000459339 135 ntBASIC2.51□□□□□ -2.01
CDX4O14627 RN7SL636P-201ENST00000497504 294 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC107401.1-201ENST00000503426 685 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.51□□□□□ -2.01
CDX4O14627 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.51□□□□□ -2.01
CDX4O14627 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.51□□□□□ -2.01
CDX4O14627 RNU6-390P-201ENST00000516259 103 ntBASIC2.51□□□□□ -2.01
CDX4O14627 SNORA18.6-201ENST00000516792 115 ntBASIC2.51□□□□□ -2.01
CDX4O14627 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CDX4O14627 AP003122.4-201ENST00000530980 758 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX4O14627 AC093012.1-202ENST00000549403 582 ntBASIC2.51□□□□□ -2.01
CDX4O14627 RPL21P5-201ENST00000554662 472 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.51□□□□□ -2.01
CDX4O14627 HMGN1P30-201ENST00000589286 268 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC090578.1-201ENST00000604955 591 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AL355472.4-201ENST00000610233 626 ntBASIC2.51□□□□□ -2.01
CDX4O14627 SNHG22-203ENST00000617833 660 ntBASIC2.51□□□□□ -2.01
CDX4O14627 AC099654.13-201ENST00000639774 207 ntBASIC2.51□□□□□ -2.01
CDX4O14627 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CDX4O14627 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDX4O14627 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDX4O14627 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CDX4O14627 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CDX4O14627 RNY4P34-201ENST00000364779 95 ntBASIC2.5□□□□□ -2.01
CDX4O14627 RNU6-741P-201ENST00000383889 107 ntBASIC2.5□□□□□ -2.01
CDX4O14627 MRPL42P2-201ENST00000403169 426 ntBASIC2.5□□□□□ -2.01
CDX4O14627 RNU6-195P-201ENST00000411352 109 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AL513331.1-201ENST00000411908 397 ntBASIC2.5□□□□□ -2.01
CDX4O14627 BX295541.1-201ENST00000417774 250 ntBASIC2.5□□□□□ -2.01
CDX4O14627 MTCO3P30-201ENST00000426425 670 ntBASIC2.5□□□□□ -2.01
CDX4O14627 C8orf59P1-201ENST00000429930 303 ntBASIC2.5□□□□□ -2.01
CDX4O14627 TIMM9P1-201ENST00000436122 256 ntBASIC2.5□□□□□ -2.01
CDX4O14627 MTND6P13-201ENST00000443510 523 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC125238.1-201ENST00000448842 249 ntBASIC2.5□□□□□ -2.01
CDX4O14627 GAPDHP17-201ENST00000449858 1001 ntBASIC2.5□□□□□ -2.01
CDX4O14627 UQCRHP3-201ENST00000451503 251 ntBASIC2.5□□□□□ -2.01
CDX4O14627 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX4O14627 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX4O14627 MTND1P3-201ENST00000484956 952 ntBASIC2.5□□□□□ -2.01
CDX4O14627 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.5□□□□□ -2.01
CDX4O14627 RNU6-1256P-201ENST00000516539 103 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX4O14627 AC022616.6-201ENST00000520479 119 ntBASIC2.5□□□□□ -2.01
CDX4O14627 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDX4O14627 AP003181.2-201ENST00000528941 181 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX4O14627 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX4O14627 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX4O14627 MIR3146-201ENST00000580367 79 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.5□□□□□ -2.01
CDX4O14627 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.5□□□□□ -2.01
CDX4O14627 AC002545.1-201ENST00000592511 181 ntBASIC2.5□□□□□ -2.01
CDX4O14627 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC245517.5-201ENST00000611529 162 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AP001506.1-201ENST00000615444 211 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AL138880.2-201ENST00000616214 239 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX4O14627 AC108479.2-201ENST00000617314 601 ntBASIC2.5□□□□□ -2.01
CDX4O14627 FRG1KP-201ENST00000623592 341 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC110994.2-201ENST00000635481 492 ntBASIC2.5□□□□□ -2.01
CDX4O14627 AC099654.12-201ENST00000639868 649 ntBASIC2.5□□□□□ -2.01
CDX4O14627 MTND5P26-201ENST00000426018 1752 ntBASIC2.5□□□□□ -2.01
CDX4O14627 FAM35CP-201ENST00000554755 2470 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms