Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBFD1O14562 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBFD1O14562 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
UBFD1O14562 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBFD1O14562 AL139397.2-201ENST00000404529 772 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 TPMTP3-201ENST00000411928 735 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.56□□□□□ -2.16
UBFD1O14562 CYCSP48-201ENST00000417124 323 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 HMGB1P9-201ENST00000429856 646 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.56□□□□□ -2.16
UBFD1O14562 CECR9-201ENST00000453421 199 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 USP9YP10-201ENST00000454868 628 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.56□□□□□ -2.16
UBFD1O14562 AC021382.1-201ENST00000483523 359 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AC068781.1-201ENST00000488231 618 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AC093752.1-206ENST00000511823 336 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 MTND2P31-201ENST00000512602 616 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 RNU6-150P-201ENST00000516237 95 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 RNU6-1028P-201ENST00000517164 93 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.56□□□□□ -2.16
UBFD1O14562 AL132657.2-201ENST00000564417 358 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AC022662.1-201ENST00000580252 331 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.56□□□□□ -2.16
UBFD1O14562 AC004805.2-201ENST00000605382 482 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AL021997.1-201ENST00000605757 193 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 TUG1_2.1-201ENST00000614234 87 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.56□□□□□ -2.16
UBFD1O14562 AC231657.1-201ENST00000624313 397 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 AC116618.1-201ENST00000634617 774 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 U2.21-201ENST00000637295 81 ntBASIC1.56□□□□□ -2.16
UBFD1O14562 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
UBFD1O14562 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.55□□□□□ -2.16
UBFD1O14562 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBFD1O14562 Y_RNA.269-201ENST00000364685 89 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 Z98749.2-208ENST00000381646 500 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 SNORA40.2-201ENST00000390847 128 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 Y_RNA.578-201ENST00000390903 88 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 RNU6-754P-201ENST00000391166 107 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 RNU6-516P-201ENST00000411381 104 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.55□□□□□ -2.16
UBFD1O14562 USP9YP13-201ENST00000417797 480 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 BTF3L4P3-201ENST00000418879 476 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 HMGB1P49-201ENST00000418882 569 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.55□□□□□ -2.16
UBFD1O14562 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.55□□□□□ -2.16
UBFD1O14562 EIF4EP4-201ENST00000424916 578 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 HMGB1P27-201ENST00000431429 603 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.55□□□□□ -2.16
UBFD1O14562 SNRPEP9-201ENST00000436794 238 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 IFNA20P-201ENST00000436840 528 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 MTND4P6-201ENST00000438297 472 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.55□□□□□ -2.16
UBFD1O14562 ARPC3P5-201ENST00000448802 534 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC132942.1-201ENST00000486753 483 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBFD1O14562 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.55□□□□□ -2.16
UBFD1O14562 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.55□□□□□ -2.16
UBFD1O14562 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBFD1O14562 AC112198.4-201ENST00000515450 351 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.55□□□□□ -2.16
UBFD1O14562 AC087894.1-201ENST00000538359 518 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AL136520.1-202ENST00000555494 763 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBFD1O14562 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.55□□□□□ -2.16
UBFD1O14562 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AL353997.4-201ENST00000586196 166 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 MTATP6P2-201ENST00000603319 678 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC025588.2-201ENST00000604851 466 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC124016.2-201ENST00000610058 665 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC109809.1-201ENST00000619665 545 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 AC010329.5-201ENST00000623497 2174 ntBASIC1.55□□□□□ -2.16
UBFD1O14562 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBFD1O14562 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBFD1O14562 RNU6-778P-201ENST00000363269 103 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 TXNP7-201ENST00000406296 293 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 UBE2FP1-201ENST00000416536 447 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 PGBD4P6-201ENST00000421501 610 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.54□□□□□ -2.16
UBFD1O14562 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.54□□□□□ -2.16
UBFD1O14562 RPL23AP76-201ENST00000441860 458 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 SSXP1-201ENST00000453640 473 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.54□□□□□ -2.16
UBFD1O14562 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.54□□□□□ -2.16
UBFD1O14562 RPS15AP36-201ENST00000492022 382 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.54□□□□□ -2.16
UBFD1O14562 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.54□□□□□ -2.16
UBFD1O14562 AC020699.1-201ENST00000505161 445 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.54□□□□□ -2.16
UBFD1O14562 AC008837.2-201ENST00000513076 418 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AC022447.1-201ENST00000515358 464 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.54□□□□□ -2.16
UBFD1O14562 CBX3P7-201ENST00000532876 502 ntBASIC1.54□□□□□ -2.16
UBFD1O14562 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.54□□□□□ -2.16
UBFD1O14562 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.54□□□□□ -2.16
UBFD1O14562 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.54□□□□□ -2.16
UBFD1O14562 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 301.7 ms