Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AL603825.1-201ENST00000438481 80 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.74□□□□□ -2.29
HMGN4O00479 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.74□□□□□ -2.29
HMGN4O00479 MTND1P33-201ENST00000446251 917 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN4O00479 AL590365.1-201ENST00000450788 243 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 RNA5SP57-201ENST00000459463 123 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AC093767.1-201ENST00000504523 156 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 TRMT112P2-201ENST00000512910 132 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AC008837.2-201ENST00000513076 418 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 RNU6-491P-201ENST00000516099 110 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 RNU6-1256P-201ENST00000516539 103 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
HMGN4O00479 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGN4O00479 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN4O00479 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.74□□□□□ -2.29
HMGN4O00479 MIR4422-201ENST00000581938 83 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN4O00479 DUXAP10-204ENST00000612052 616 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
HMGN4O00479 AL359757.2-201ENST00000624309 274 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGN4O00479 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
HMGN4O00479 AC005539.1-201ENST00000443768 1479 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 MIR421-201ENST00000365696 85 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HMGN4O00479 ATP5F1P6-201ENST00000402768 767 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 RNU6-321P-201ENST00000410912 106 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 AP000275.1-201ENST00000411943 390 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.73□□□□□ -2.29
HMGN4O00479 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGN4O00479 AL354941.1-201ENST00000438600 464 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGN4O00479 AC108078.2-201ENST00000510750 236 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 HSPA8P13-201ENST00000523715 472 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.73□□□□□ -2.29
HMGN4O00479 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGN4O00479 AL356432.3-201ENST00000568952 465 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 AC138473.1-201ENST00000605717 526 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 AP003485.1-201ENST00000625093 753 ntBASIC0.73□□□□□ -2.29
HMGN4O00479 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
HMGN4O00479 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.73□□□□□ -2.29
HMGN4O00479 RNA5SP240-201ENST00000365355 128 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 MIR514A1-201ENST00000385133 98 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
HMGN4O00479 RNU1-78P-201ENST00000391248 165 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 MIR888-201ENST00000401186 77 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 BEND7P1-201ENST00000422058 457 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 BPY2DP-201ENST00000422208 265 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 ZNF863P-201ENST00000426746 417 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN4O00479 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN4O00479 TOMM22P6-201ENST00000465035 409 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 AC132942.1-201ENST00000486753 483 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HMGN4O00479 AC139453.3-201ENST00000493276 369 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 RNU6-237P-201ENST00000515985 71 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 RNU6-113P-201ENST00000516653 101 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN4O00479 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN4O00479 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN4O00479 AC026271.5-201ENST00000577873 130 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 AC018618.2-201ENST00000604770 446 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 AC097468.3-201ENST00000607956 456 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 FTX_3.1-201ENST00000610451 147 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 MIR5739-201ENST00000619803 80 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.72□□□□□ -2.29
HMGN4O00479 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGN4O00479 AL359854.1-201ENST00000614203 1594 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 RNU6-543P-201ENST00000362576 108 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 RNU6-251P-201ENST00000363235 104 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 SNORA25B-201ENST00000365507 128 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 MIR1283-2-201ENST00000408621 87 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AL160275.3-201ENST00000423876 471 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 UBE2V1P4-201ENST00000425374 344 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 THAP5P1-201ENST00000439089 262 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 CALM1P1-201ENST00000442082 433 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 MTND1P18-201ENST00000448191 573 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 RFC5P1-201ENST00000454419 874 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AC021382.1-201ENST00000483523 359 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AC108729.3-201ENST00000513484 108 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN4O00479 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN4O00479 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.71□□□□□ -2.3
HMGN4O00479 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.71□□□□□ -2.3
HMGN4O00479 AC004217.3-201ENST00000551552 878 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGN4O00479 AL359212.1-201ENST00000556608 614 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 STMN1P1-201ENST00000617809 440 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AC099842.1-201ENST00000619919 596 ntBASIC0.71□□□□□ -2.3
HMGN4O00479 AL118508.4-201ENST00000624142 1176 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms