Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNY4P24-201ENST00000362735 96 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 SNORA23-201ENST00000365128 182 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU5E-5P-201ENST00000365379 116 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR5H15-201ENST00000383696 930 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL139397.2-201ENST00000404529 772 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 HMGB3P2-201ENST00000411913 584 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 NDUFB4P7-201ENST00000423198 363 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL356583.2-201ENST00000426536 280 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTND1P30-201ENST00000441241 901 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 IPO7P1-201ENST00000442031 636 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL590664.1-201ENST00000448065 339 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPS15AP36-201ENST00000492022 382 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC108210.2-201ENST00000503681 201 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR5BM1P-201ENST00000512021 366 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 FABP5P5-201ENST00000515537 406 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 NRON-201ENST00000517270 370 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 CASP1P1-201ENST00000526345 212 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AP003181.2-201ENST00000528941 181 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL356057.1-201ENST00000533798 831 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 NRBF2P1-201ENST00000587407 859 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 U73023.1-201ENST00000603134 700 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 BNIP3P10-201ENST00000605360 577 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AP000254.1-201ENST00000609934 520 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL159972.1-201ENST00000625150 448 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTCO1P9-201ENST00000505577 1534 ntBASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TMX2-CTNND1H3BSU7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 U3.4-201ENST00000363352 213 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-173P-201ENST00000364215 104 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-533P-201ENST00000384144 107 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 SNORD116-1-201ENST00000384335 95 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR514A1-201ENST00000385133 98 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR493-201ENST00000385254 89 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-482P-201ENST00000391068 107 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC018630.2-202ENST00000422992 927 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 HMGN2P3-201ENST00000433603 273 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 TIMM9P1-201ENST00000436122 256 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 HMGN2P5-201ENST00000436882 273 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPS15AP7-201ENST00000439294 405 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC005094.1-201ENST00000440420 368 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 MTATP6P26-201ENST00000445926 662 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 Z83846.1-201ENST00000446798 265 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL590365.1-201ENST00000450788 243 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPL31P60-201ENST00000478450 367 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC093534.1-201ENST00000504977 132 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AF131216.2-201ENST00000512316 564 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 COX6CP3-201ENST00000580869 223 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC013553.2-201ENST00000604244 589 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC239868.4-201ENST00000608318 671 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC009570.1-201ENST00000609599 745 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR10AB1P-201ENST00000609613 938 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC091931.1-201ENST00000623488 728 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC091953.2-201ENST00000623979 160 ntBASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TMX2-CTNND1H3BSU7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-297P-201ENST00000384636 107 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 MIR524-201ENST00000385242 87 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL022238.1-201ENST00000442557 355 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 RAP1BP2-201ENST00000478270 544 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AL135752.1-201ENST00000479477 471 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 RPL30P14-201ENST00000482744 348 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 TTC39CP1-201ENST00000512513 755 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 RNU6-64P-201ENST00000517119 105 ntBASIC2.18□□□□□ -2.06
TMX2-CTNND1H3BSU7 AC022616.6-201ENST00000520479 119 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms