Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 LARP1BP2-201ENST00000486594 519 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC112204.1-201ENST00000502591 103 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC091435.1-201ENST00000505442 584 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC010587.1-201ENST00000505809 469 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 MTND2P33-201ENST00000506452 1031 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 ARL2BPP4-201ENST00000506854 471 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RAC1P5-201ENST00000512182 576 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-201P-201ENST00000517100 61 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC009063.1-201ENST00000563342 702 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC013476.2-201ENST00000614456 459 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC090132.2-201ENST00000615881 347 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 MIR6766-201ENST00000622641 72 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 AC068880.5-201ENST00000624331 290 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 MTCO1P9-201ENST00000505577 1534 ntBASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM49D1C9J1S8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 RNU5A-8P-201ENST00000364102 114 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL356057.2-201ENST00000403318 432 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 RN7SKP140-201ENST00000411196 284 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 MTCO1P21-201ENST00000416634 589 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL513477.1-202ENST00000417061 214 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 TMEM167AP1-201ENST00000423409 219 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 MTCO2P7-201ENST00000446518 666 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC022616.3-201ENST00000523940 148 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AP000873.5-201ENST00000533906 236 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 MTCYBP33-201ENST00000575007 1130 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 MIR3167-201ENST00000579623 85 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC005771.1-201ENST00000585581 349 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC068790.3-201ENST00000602988 553 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL161729.4-201ENST00000604650 476 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 HSPE1P7-201ENST00000604681 321 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC090578.1-201ENST00000604955 591 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL451064.1-201ENST00000607718 471 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC046143.2-201ENST00000609789 160 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 Z99129.1-201ENST00000612510 255 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AL589743.7-201ENST00000612637 233 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC139792.2-201ENST00000624218 587 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AC068137.4-201ENST00000638485 296 ntBASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
TRIM49D1C9J1S8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-432P-201ENST00000384196 109 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-780P-201ENST00000391030 104 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 RPL27AP8-201ENST00000424277 446 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 UBE2V1P13-201ENST00000436983 439 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC008481.1-201ENST00000463278 396 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 GZMAP1-201ENST00000503054 631 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 Y_RNA.655-201ENST00000515919 96 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 SCARNA24.1-201ENST00000516465 137 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 RNU6-430P-201ENST00000517078 107 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 RN7SKP40-201ENST00000517211 242 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC105224.1-201ENST00000587055 421 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AC087683.1-201ENST00000591187 441 ntBASIC2.28□□□□□ -2.04
TRIM49D1C9J1S8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms