Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AL691449.1-201ENST00000426570 421 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AL451050.1-201ENST00000450126 415 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.653-201ENST00000459091 95 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC006445.2-201ENST00000510061 472 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1213P-201ENST00000517075 94 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AL163153.1-201ENST00000554223 283 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC100830.2-201ENST00000581636 240 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC244505.7-201ENST00000599675 272 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AL160290.3-201ENST00000604869 165 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC007938.3-201ENST00000604965 623 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AL121772.2-201ENST00000614331 297 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 RMST_4.1-201ENST00000616886 107 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC006111.3-201ENST00000622137 383 ntBASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC163A0A0D9SF12 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 MIR369-201ENST00000362155 70 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 SNORD62.1-201ENST00000362541 86 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.138-201ENST00000363462 102 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 SNORA73.2-201ENST00000364946 201 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.315-201ENST00000365117 102 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-217P-201ENST00000384164 104 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-43P-201ENST00000384302 107 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 HSPE1P12-201ENST00000412576 301 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC245054.2-201ENST00000415639 319 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 UBE2V1P4-201ENST00000425374 344 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC098614.2-201ENST00000426040 255 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC005534.2-201ENST00000431047 433 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 HIGD1AP11-201ENST00000438361 280 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 BRK1P2-201ENST00000442875 223 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 RNU7-187P-201ENST00000458985 68 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC116337.1-201ENST00000509680 687 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC026403.1-201ENST00000518938 295 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC093249.1-201ENST00000567049 203 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AL645944.1-201ENST00000603857 493 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 AC019193.3-201ENST00000609144 554 ntBASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC163A0A0D9SF12 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 SNORA63-201ENST00000363450 132 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 Y_RNA.151-201ENST00000363566 112 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RNU1-44P-201ENST00000384453 163 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-1106P-201ENST00000390845 107 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RPS4XP3-201ENST00000398541 413 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RNU4-6P-201ENST00000410804 122 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RNU6-293P-201ENST00000411259 106 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL160275.2-201ENST00000412010 394 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL354751.2-201ENST00000415471 210 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 HMGN2P30-201ENST00000423237 256 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL353729.1-201ENST00000425044 720 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 HMGB3P8-201ENST00000449709 577 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RPL7P49-201ENST00000471402 708 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AC026726.1-201ENST00000512859 601 ntBASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC163A0A0D9SF12 H3F3AP1-201ENST00000559984 334 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms