Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 MIR3618-201ENST00000580330 88 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 VN1R83P-201ENST00000595685 445 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 AC098826.3-201ENST00000603823 466 ntBASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
TRAV41A0A0B4J266 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL359854.1-201ENST00000614203 1594 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-289P-201ENST00000364093 107 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-224P-201ENST00000384055 107 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 MIR1294-201ENST00000408503 142 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 RNU2-63P-201ENST00000410792 194 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 RNU2-72P-201ENST00000411175 163 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 MTND1P21-201ENST00000412991 285 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC096920.1-201ENST00000423991 241 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 DNAJC19P4-201ENST00000440115 345 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 MTCO3P45-201ENST00000443036 613 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC020550.1-201ENST00000447385 163 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 MTND1P9-201ENST00000453775 944 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC096571.1-202ENST00000506634 735 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AK6P1-201ENST00000540219 478 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 LINC00933-203ENST00000559812 219 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL512347.1-201ENST00000566420 503 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 MTND3P13-201ENST00000574391 343 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AF038458.1-201ENST00000588406 262 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 DPPA3P3-201ENST00000603842 430 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AL138963.2-201ENST00000605137 226 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC018926.1-201ENST00000616335 435 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 AC126544.2-201ENST00000625174 749 ntBASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV41A0A0B4J266 RNU4-51P-201ENST00000364206 140 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 Y_RNA.245-201ENST00000364493 95 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-432P-201ENST00000384196 109 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 MIR504-201ENST00000385065 83 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 SNORA26.9-201ENST00000391322 122 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 HMGN2P39-201ENST00000398005 273 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 NDUFS5P1-201ENST00000405668 289 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RPL23AP39-201ENST00000415533 405 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AL158823.1-201ENST00000418441 478 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 TIMM9P2-201ENST00000419324 266 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RPL31P63-201ENST00000422565 375 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AL645568.3-201ENST00000433683 316 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 EEF1E1P1-201ENST00000446998 430 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC069528.1-202ENST00000482888 637 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RPS29P11-201ENST00000496507 171 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RNU6-927P-201ENST00000516199 100 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 RNA5SP165-201ENST00000517142 115 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC021451.1-201ENST00000523498 1129 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC006199.1-201ENST00000548728 219 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 MIR3122-201ENST00000577243 73 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC091152.3-201ENST00000604227 325 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC106052.1-201ENST00000608029 497 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC084824.5-201ENST00000612009 413 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AC107308.1-201ENST00000615897 301 ntBASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.38□□□□□ -2.19
TRAV41A0A0B4J266 AP000943.4-201ENST00000622912 357 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms