Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU6-550P-201ENST00000391057 101 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 UBE2V1P2-201ENST00000397758 440 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 NCOR1P3-201ENST00000420479 303 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AC097713.2-201ENST00000430199 356 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 MTND3P16-201ENST00000452205 344 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RNU7-180P-201ENST00000459240 63 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AC130509.1-201ENST00000464158 433 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RPS23P3-201ENST00000470993 430 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RNU6-1046P-201ENST00000516538 107 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.711-201ENST00000516993 102 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 RANP9-201ENST00000519957 271 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AP001804.3-201ENST00000525146 880 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 BNIP3P6-201ENST00000549284 499 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AL121576.1-201ENST00000556055 276 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 MIR4742-201ENST00000581069 85 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AL158032.1-201ENST00000605401 106 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 MIR7851-201ENST00000610611 160 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 AC034102.8-201ENST00000615146 484 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.54□□□□□ -1.84
CCDC187A0A096LP49 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.231-201ENST00000364358 102 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.422-201ENST00000384054 114 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 RNU6-43P-201ENST00000384302 107 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 MIR514A2-201ENST00000385131 88 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 MIR514A3-201ENST00000385132 88 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 MIR559-201ENST00000385188 96 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 Y_RNA.579-201ENST00000390939 94 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 RNA5SP424-201ENST00000390988 115 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 NDUFB4P4-201ENST00000404822 243 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL645937.1-202ENST00000421799 937 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL590383.1-201ENST00000428602 75 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL591212.2-201ENST00000433923 257 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC108059.2-201ENST00000434626 151 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 IFNA20P-201ENST00000436840 528 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 GTF2IP13-201ENST00000438487 386 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AF228730.2-201ENST00000438784 848 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 RPL23AP62-201ENST00000463396 453 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL137161.1-201ENST00000532231 390 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 MIR4424-201ENST00000585257 86 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL138889.2-201ENST00000603883 242 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC124312.5-201ENST00000604451 268 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL670379.4-201ENST00000605279 254 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 U7.8-201ENST00000619968 63 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC090971.5-201ENST00000621102 293 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 AC007792.1-201ENST00000623023 402 ntBASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC187A0A096LP49 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.53□□□□□ -1.85
CCDC187A0A096LP49 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.53□□□□□ -1.85
CCDC187A0A096LP49 MTND5P16-201ENST00000460269 1703 ntBASIC3.53□□□□□ -1.85
CCDC187A0A096LP49 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 MTND4P35-201ENST00000604257 1375 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AC008568.2-201ENST00000623862 2313 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 SNORD9-201ENST00000362566 104 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RNU6-288P-201ENST00000363690 104 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RNU4-20P-201ENST00000365601 151 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RNU6-38P-201ENST00000384085 107 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 MIR634-201ENST00000385208 97 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AL591034.1-201ENST00000407447 340 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RPS12P24-201ENST00000412619 387 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AC080125.1-201ENST00000414888 684 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AC092809.3-201ENST00000415453 231 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AL159169.1-201ENST00000421119 127 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 Z82205.1-201ENST00000428456 297 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 ERLEC1P1-201ENST00000433806 578 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 HMGB1P18-201ENST00000438801 619 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 CYCSP32-201ENST00000440548 321 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RNU6-333P-201ENST00000459117 107 ntBASIC3.52□□□□□ -1.85
CCDC187A0A096LP49 RNU6-329P-201ENST00000459618 107 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms