Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-37P-201ENST00000362692 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-653P-201ENST00000363074 106 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-11P-201ENST00000364234 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-7-201ENST00000364784 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNA5SP173-201ENST00000364857 136 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-294P-201ENST00000364999 102 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-8-201ENST00000365467 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-25P-201ENST00000383873 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-1-201ENST00000383898 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-32P-201ENST00000383948 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-4P-201ENST00000384205 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-5P-201ENST00000384238 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-17P-201ENST00000384245 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-13P-201ENST00000384248 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-3P-201ENST00000384314 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-18P-201ENST00000384527 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-12P-201ENST00000384604 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-2-201ENST00000384627 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-29P-201ENST00000384637 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-41P-201ENST00000384741 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-9-201ENST00000384776 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 MIR190B-201ENST00000401119 79 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RN7SKP213-201ENST00000410746 298 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 Y_RNA.623-201ENST00000411128 95 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RPL23AP27-201ENST00000415161 451 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AC022795.1-201ENST00000473808 480 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RPS27AP9-201ENST00000477681 438 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 SNORA31.8-201ENST00000516327 108 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AC027369.5-201ENST00000533838 755 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AC007448.1-201ENST00000582714 234 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AC006272.2-201ENST00000594725 163 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-6P-201ENST00000606623 107 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AP001273.1-201ENST00000624493 3152 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 LINC01109-201ENST00000603837 3081 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 AC139713.2-214ENST00000642059 1811 ntBASIC5.07□□□□□ -1.6
DNMT3AQ9Y6K1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RAD17P1-201ENST00000418130 2042 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC110491.1-201ENST00000562191 2010 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 MIR450A1-201ENST00000362262 91 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNA5SP507-201ENST00000363603 121 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU4-56P-201ENST00000364700 142 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-384P-201ENST00000364900 104 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-36P-201ENST00000384172 107 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-16P-201ENST00000384385 107 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-15P-201ENST00000384534 107 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU6-239P-201ENST00000390990 99 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU2-2P-201ENST00000410396 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AL592148.1-201ENST00000413568 445 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RN7SKP66-201ENST00000516681 231 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC092490.3-201ENST00000545370 572 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RPL21P9-201ENST00000556149 474 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 MIR5692C2-201ENST00000577959 77 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 MIR4659A-201ENST00000580269 81 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC090616.3-201ENST00000582184 217 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC023043.3-201ENST00000593113 385 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AL133393.1-201ENST00000603277 287 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU2-4P-201ENST00000606190 192 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.15-201ENST00000611544 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.16-201ENST00000613119 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.12-201ENST00000613778 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RPSAP73-201ENST00000614820 330 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.9-201ENST00000615427 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.11-201ENST00000616345 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.2-201ENST00000616535 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.3-201ENST00000617785 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.19-201ENST00000618602 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RNU2-1-201ENST00000618664 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.6-201ENST00000619225 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.5-201ENST00000619465 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 U2.10-201ENST00000620268 191 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 AP002799.1-201ENST00000623552 423 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 MIR3658-201ENST00000636291 56 ntBASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DNMT3AQ9Y6K1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms