Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.57□□□□□ -2
USP16Q9Y5T5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.57□□□□□ -2
USP16Q9Y5T5 AC002545.1-201ENST00000592511 181 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 BCRP9-201ENST00000605312 388 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 AC007038.2-201ENST00000608095 740 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 AC103710.4-201ENST00000609301 899 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 AC011890.2-201ENST00000613393 294 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 AC010133.1-201ENST00000615809 842 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 AC131159.1-201ENST00000621854 213 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 MTND4P16-201ENST00000466108 1367 ntBASIC2.57□□□□□ -2
USP16Q9Y5T5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USP16Q9Y5T5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.57□□□□□ -2
USP16Q9Y5T5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
USP16Q9Y5T5 AL049641.1-201ENST00000441055 1948 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 MIRLET7G-201ENST00000362280 84 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 SNORA40.18-201ENST00000391200 128 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AL513331.1-201ENST00000411908 397 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 Z85995.1-201ENST00000415547 335 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.56□□□□□ -2
USP16Q9Y5T5 RPS27AP14-201ENST00000422868 454 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
USP16Q9Y5T5 Z82210.1-201ENST00000440037 231 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 ELOCP30-201ENST00000447108 299 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.56□□□□□ -2
USP16Q9Y5T5 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.56□□□□□ -2
USP16Q9Y5T5 AL135752.1-201ENST00000479477 471 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 RPS15AP36-201ENST00000492022 382 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.56□□□□□ -2
USP16Q9Y5T5 MTND1P22-201ENST00000510572 951 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 RNU6-548P-201ENST00000517083 115 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 RNU1-104P-201ENST00000517280 175 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AP000907.2-201ENST00000530827 353 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.56□□□□□ -2
USP16Q9Y5T5 TRAV28-201ENST00000557548 323 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AL133153.1-201ENST00000557756 303 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
USP16Q9Y5T5 AC079395.3-201ENST00000615161 484 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AL161629.2-201ENST00000615347 275 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.56□□□□□ -2
USP16Q9Y5T5 AC097655.1-201ENST00000635075 318 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AC110079.1-202ENST00000635213 138 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 CCT4P2-201ENST00000233836 1548 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.56□□□□□ -2
USP16Q9Y5T5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
USP16Q9Y5T5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
USP16Q9Y5T5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USP16Q9Y5T5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
USP16Q9Y5T5 RNU5A-8P-201ENST00000364102 114 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 RNU6-1035P-201ENST00000384477 107 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 U8.14-201ENST00000390843 143 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 RNU6-278P-201ENST00000390945 109 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 MTND4P20-201ENST00000424125 869 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 MTND5P25-201ENST00000430499 799 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 LARP1BP3-201ENST00000437229 869 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.55□□□□□ -2
USP16Q9Y5T5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.55□□□□□ -2
USP16Q9Y5T5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.55□□□□□ -2
USP16Q9Y5T5 MTND5P2-201ENST00000442927 1142 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.55□□□□□ -2
USP16Q9Y5T5 MTAPP1-201ENST00000489154 819 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 FAM92A1P2-202ENST00000504766 877 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 RPL37P25-201ENST00000507308 276 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP16Q9Y5T5 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.55□□□□□ -2
USP16Q9Y5T5 AP002748.2-201ENST00000528671 348 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.55□□□□□ -2
USP16Q9Y5T5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.55□□□□□ -2
USP16Q9Y5T5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP16Q9Y5T5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.55□□□□□ -2
USP16Q9Y5T5 AC090888.1-201ENST00000561335 1141 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 PCMTD1P2-201ENST00000565017 355 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 AC068135.2-201ENST00000569293 1028 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 MTATP6P24-201ENST00000576835 677 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 MIR4307-201ENST00000582802 84 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 AC063944.3-201ENST00000609969 533 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 AC004852.3-201ENST00000614131 326 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 AC112204.3-201ENST00000623822 332 ntBASIC2.55□□□□□ -2
USP16Q9Y5T5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.55□□□□□ -2
USP16Q9Y5T5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
USP16Q9Y5T5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.54□□□□□ -2
USP16Q9Y5T5 ZNF72P-201ENST00000425869 1908 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USP16Q9Y5T5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
USP16Q9Y5T5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.54□□□□□ -2
USP16Q9Y5T5 RNU6-270P-201ENST00000364131 105 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 MIR19A-201ENST00000384878 82 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.54□□□□□ -2
USP16Q9Y5T5 RPL21P24-201ENST00000413752 448 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 AL451054.2-201ENST00000420896 202 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.54□□□□□ -2
USP16Q9Y5T5 AL445669.1-201ENST00000426743 755 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 ARPC3P1-201ENST00000437218 533 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.54□□□□□ -2
USP16Q9Y5T5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.54□□□□□ -2
USP16Q9Y5T5 BMI1P1-201ENST00000445879 941 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 OR6C5P-201ENST00000452388 923 ntBASIC2.54□□□□□ -2
USP16Q9Y5T5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms