Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR3944-201ENST00000581277 108 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC073539.2-201ENST00000597113 165 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 SNORA51-201ENST00000606420 132 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC009233.1-201ENST00000616477 371 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 U7.8-201ENST00000619968 63 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA3Q9Y5H0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 Y_RNA.11-201ENST00000362375 109 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR34A-201ENST00000385130 110 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR450B-201ENST00000401182 78 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AL122016.1-201ENST00000403365 367 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 RNU6-1148P-201ENST00000410992 104 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 RPL26P27-201ENST00000414397 437 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 HMGN2P30-201ENST00000423237 256 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 MTND3P23-201ENST00000431980 347 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 RPL37P4-201ENST00000448908 268 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 HMGB3P8-201ENST00000449709 577 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 MTATP6P7-201ENST00000453315 681 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 CEACAMP4-201ENST00000457676 421 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 MTND3P25-201ENST00000509243 135 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AC025755.1-201ENST00000521306 278 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 NACAP3-201ENST00000552100 481 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 MIR486-1-201ENST00000612171 68 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 TPTEP1-208ENST00000636884 213 ntBASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDHGA3Q9Y5H0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDHGA3Q9Y5H0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.84□□□□□ -1.8
PCDHGA3Q9Y5H0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.84□□□□□ -1.8
PCDHGA3Q9Y5H0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AL353746.1-201ENST00000566293 6881 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-266P-201ENST00000364225 107 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORD6-201ENST00000365444 73 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA70.4-201ENST00000365509 134 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AL356432.1-201ENST00000405809 419 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA57.3-201ENST00000411095 141 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 NDUFB4P5-201ENST00000415445 361 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AL139396.1-201ENST00000421137 167 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC098614.2-201ENST00000426040 255 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 MYL8P-204ENST00000431574 518 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU7-66P-201ENST00000459469 62 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 RPL31P61-201ENST00000496160 376 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC006445.2-201ENST00000510061 472 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-256P-201ENST00000516747 97 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC025627.2-201ENST00000576220 160 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC104662.1-201ENST00000604448 511 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC021646.1-201ENST00000605469 484 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC104237.2-201ENST00000612456 443 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 MIR7702-201ENST00000621931 59 ntBASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PCDHGA3Q9Y5H0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 MTND5P7-201ENST00000413558 1798 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 Y_RNA.356-201ENST00000365475 113 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RNU6-214P-201ENST00000384130 107 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 SNORA40C-201ENST00000391285 128 ntBASIC3.82□□□□□ -1.8
PCDHGA3Q9Y5H0 RAB9AP3-201ENST00000412737 573 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms