Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RPS23P7-201ENST00000466210 444 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORA70.20-201ENST00000516848 126 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 HMGN2P36-201ENST00000529541 409 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 AC120024.3-201ENST00000603167 156 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 SUMO2P15-201ENST00000604285 278 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 AL136131.3-201ENST00000607600 188 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR6730-201ENST00000622213 67 ntBASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PCDHGA4Q9Y5G9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 MAPK10-349ENST00000641767 3661 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 SELENOWP1-201ENST00000322792 252 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 U8.1-201ENST00000362843 134 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-942P-201ENST00000363002 107 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-356P-201ENST00000384140 107 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 AC105254.2-201ENST00000603636 436 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 AC009962.1-201ENST00000567327 3813 ntBASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PCDHGA4Q9Y5G9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AC004076.2-201ENST00000620532 3323 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR367-201ENST00000362299 68 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORD56.1-201ENST00000362913 68 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 SNORA58B-201ENST00000364259 136 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-454P-201ENST00000364292 107 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNA5SP132-201ENST00000364725 118 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNA5SP173-201ENST00000364857 136 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 Y_RNA.346-201ENST00000365385 112 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 Y_RNA.368-201ENST00000365547 113 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-1264P-201ENST00000383891 107 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNY3P5-201ENST00000384127 102 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-146P-201ENST00000384602 108 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AC005042.1-201ENST00000393397 800 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AL031003.1-201ENST00000404229 172 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AL356867.1-201ENST00000429623 299 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AC099670.2-201ENST00000435130 321 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AC006028.1-201ENST00000438379 402 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AL451050.1-201ENST00000450126 415 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RN7SL466P-201ENST00000497546 295 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RN7SKP288-201ENST00000516227 268 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-941P-201ENST00000516346 108 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RNA5SP291-201ENST00000517222 105 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 AC019159.1-201ENST00000605094 187 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR6798-201ENST00000612887 67 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 MIR1245B-201ENST00000636115 69 ntBASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
PCDHGA4Q9Y5G9 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC092268.1-201ENST00000342691 405 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 RNU6-727P-201ENST00000363592 107 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC016739.1-201ENST00000405359 345 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 MLLT10P1-201ENST00000418346 262 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 RPS26P47-201ENST00000427219 348 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC078809.1-201ENST00000427601 140 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC007969.2-201ENST00000441891 191 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 AC007215.1-201ENST00000464893 276 ntBASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHGA4Q9Y5G9 Y_RNA.685-201ENST00000516532 108 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms