Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AL500522.2-201ENST00000448562 343 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 RPL12P25-201ENST00000455592 494 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AMD1P1-201ENST00000457220 922 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC105029.1-201ENST00000520250 669 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC100830.2-201ENST00000581636 240 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC023043.2-201ENST00000589678 1026 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORA51-201ENST00000606420 132 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC002044.1-201ENST00000606707 158 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC128687.2-201ENST00000609657 566 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC068831.7-201ENST00000616954 363 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 RMST_7.1-201ENST00000621935 268 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC006111.3-201ENST00000622137 383 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC073308.1-201ENST00000623696 305 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 ZNF962P-201ENST00000443465 3140 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
PCDHGA9Q9Y5G4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORD66.1-201ENST00000391230 76 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 SNORA11.1-201ENST00000408133 129 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU4-6P-201ENST00000410804 122 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 CYCSP33-201ENST00000414485 327 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 RPL23AP82-202ENST00000427528 469 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AL359672.1-201ENST00000442302 409 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 MRPL50P4-201ENST00000446432 475 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC139453.3-201ENST00000493276 369 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC007151.1-201ENST00000572774 483 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 RPS3AP23-202ENST00000574601 686 ntBASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHGA9Q9Y5G4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 MTND4P29-201ENST00000503122 1372 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AC073544.1-201ENST00000600110 1595 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU1-73P-201ENST00000383971 164 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-213P-201ENST00000384051 104 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-166P-201ENST00000384371 107 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 MIR7-3-201ENST00000384898 110 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-1106P-201ENST00000390845 107 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-328P-201ENST00000390887 106 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AL360182.1-201ENST00000397433 468 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AC074085.1-201ENST00000413598 418 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 MTND4P28-201ENST00000426217 387 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 SSXP4-201ENST00000451349 245 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AL583843.1-201ENST00000456070 346 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AC006026.2-201ENST00000457376 180 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AC006517.1-201ENST00000480485 328 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU1-103P-201ENST00000516502 125 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 RNU6-566P-201ENST00000516790 107 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 SCOCP1-201ENST00000554676 349 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 MIR3672-201ENST00000584290 82 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AC005858.4-201ENST00000623191 700 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 AL359697.1-201ENST00000624879 587 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 U2.21-201ENST00000637295 81 ntBASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHGA9Q9Y5G4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHGA9Q9Y5G4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms