Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 RNU2-70P-201ENST00000410718 179 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC019070.1-201ENST00000415008 1024 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC245047.4-201ENST00000433189 144 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 HMGN2P9-201ENST00000476875 229 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 HMGB1P22-201ENST00000505315 124 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 AC006963.1-201ENST00000624003 1052 ntBASIC0.71□□□□□ -2.3
NRXN3Q9Y4C0 RNU6-1164P-201ENST00000364428 107 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 U3.20-201ENST00000390909 217 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 RN7SKP158-201ENST00000410453 326 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 PTENP1-201ENST00000447117 1215 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 RNA5SP165-201ENST00000517142 115 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 AP004371.1-201ENST00000525240 214 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 AP003497.1-201ENST00000528472 562 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 AC010620.1-201ENST00000601088 1102 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 AC079395.3-201ENST00000615161 484 ntBASIC0.7□□□□□ -2.3
NRXN3Q9Y4C0 MIR1912-201ENST00000410389 80 ntBASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AL158823.1-201ENST00000418441 478 ntBASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 MIR3198-2-201ENST00000577868 80 ntBASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AC126177.8-201ENST00000618339 1015 ntBASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 AC110792.3-201ENST00000595906 1614 ntBASIC0.69□□□□□ -2.3
NRXN3Q9Y4C0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 CBX3P3-201ENST00000508108 532 ntBASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 SNORA62.5-201ENST00000516634 120 ntBASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 AC004817.2-201ENST00000561794 651 ntBASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 AC021749.1-201ENST00000604322 607 ntBASIC0.68□□□□□ -2.3
NRXN3Q9Y4C0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 MIR515-2-201ENST00000384883 83 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 MIR515-1-201ENST00000384884 83 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 RNA5SP25-201ENST00000410815 110 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 RPS15AP27-201ENST00000449183 343 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 AP003717.3-201ENST00000544832 1180 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 AC068787.1-201ENST00000623908 691 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 RPS3AP24-201ENST00000407896 734 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 HMGB3P31-201ENST00000413333 595 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 AL365496.1-201ENST00000426885 215 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 RNU6-362P-201ENST00000516736 90 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 RN7SKP277-201ENST00000516895 283 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 AC016925.2-201ENST00000605108 242 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 AC095031.1-201ENST00000623685 672 ntBASIC0.67□□□□□ -2.3
NRXN3Q9Y4C0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 AC123912.3-201ENST00000600907 1367 ntBASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 HMGN1P10-201ENST00000474557 553 ntBASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 AC138853.1-201ENST00000503549 823 ntBASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 MIR4514-201ENST00000581410 57 ntBASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 MIR338-201ENST00000636369 67 ntBASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 AC087821.2-201ENST00000637086 450 ntBASIC0.66□□□□□ -2.3
NRXN3Q9Y4C0 SNORA63.3-201ENST00000362682 132 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 RNU6-288P-201ENST00000363690 104 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 RNU6-105P-201ENST00000363909 104 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 RNA5SP285-201ENST00000516619 119 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 SNORA31.13-201ENST00000516624 135 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 MIR4636-201ENST00000582271 80 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 HSPE1P7-201ENST00000604681 321 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AC091925.2-201ENST00000625059 256 ntBASIC0.65□□□□□ -2.31
NRXN3Q9Y4C0 AL034374.1-201ENST00000406329 351 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 PIGPP2-201ENST00000411569 458 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 RPL26P9-201ENST00000457466 433 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 snoU13.4-201ENST00000458916 104 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 APOOP3-201ENST00000536787 586 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AL132857.1-201ENST00000555180 708 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AC011260.1-201ENST00000578420 472 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 AC116563.2-201ENST00000624751 535 ntBASIC0.64□□□□□ -2.31
NRXN3Q9Y4C0 MIR7515-201ENST00000637837 67 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms