Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 RNA5SP295-201ENST00000362655 121 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 RNA5SP119-201ENST00000362715 117 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 Y_RNA.86-201ENST00000363020 111 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 Y_RNA.245-201ENST00000364493 95 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 MIR7-3-201ENST00000384898 110 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 MIR514A2-201ENST00000385131 88 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 MIR514A3-201ENST00000385132 88 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 MIR670-201ENST00000390142 98 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL160275.3-201ENST00000423876 471 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL591704.1-201ENST00000432574 275 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC005019.1-201ENST00000436455 431 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 KC877373.1-201ENST00000479066 408 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 RPL30P5-201ENST00000494923 336 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC093663.1-201ENST00000497190 394 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 RNU1-61P-201ENST00000516107 151 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 SNORA20.3-201ENST00000516880 132 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 RNA5SP290-201ENST00000517133 127 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 CENPUP1-201ENST00000526649 1202 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 BNIP3P6-201ENST00000549284 499 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 TRAV28-201ENST00000557548 323 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 MIR4429-201ENST00000580105 73 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL355073.2-201ENST00000612106 557 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 SNORD39.4-201ENST00000620099 78 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL512643.1-201ENST00000635735 524 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKP3Q9Y446 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AL356274.2-201ENST00000624379 3752 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PKP3Q9Y446 AC090740.1-201ENST00000623193 2262 ntBASIC3.35□□□□□ -1.87
PKP3Q9Y446 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKP3Q9Y446 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKP3Q9Y446 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKP3Q9Y446 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKP3Q9Y446 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKP3Q9Y446 SNORA72.1-201ENST00000363485 129 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 RNU6-38P-201ENST00000384085 107 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 Y_RNA.534-201ENST00000384599 112 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 MIR490-201ENST00000384865 128 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AL139039.1-201ENST00000401900 692 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AL592114.1-201ENST00000403842 483 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 SRIP2-201ENST00000428470 166 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 NEK4P1-201ENST00000433383 879 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 ERLEC1P1-201ENST00000433806 578 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 RNU6-333P-201ENST00000459117 107 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC021205.2-201ENST00000480069 347 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 RPS15AP34-201ENST00000487776 387 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC078814.3-201ENST00000553036 491 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC106782.4-201ENST00000568264 210 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 MIR5583-1-201ENST00000580941 59 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 RNU6-89P-201ENST00000606519 100 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
PKP3Q9Y446 Z99571.1-201ENST00000636677 394 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AC100810.6-201ENST00000638068 285 ntBASIC3.34□□□□□ -1.87
PKP3Q9Y446 AL049781.1-201ENST00000623195 3585 ntBASIC3.34□□□□□ -1.88
PKP3Q9Y446 Z83843.1-201ENST00000604070 3685 ntBASIC3.34□□□□□ -1.88
PKP3Q9Y446 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
PKP3Q9Y446 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.88
PKP3Q9Y446 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PKP3Q9Y446 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKP3Q9Y446 RNU1-33P-201ENST00000364249 162 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 RNU6-867P-201ENST00000364956 107 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 RNU6-332P-201ENST00000391193 108 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 BX323014.1-201ENST00000412876 237 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 AC009161.1-201ENST00000417306 376 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 RPL21P111-201ENST00000418453 477 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 ARL5AP1-201ENST00000418991 388 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 AL513185.2-201ENST00000425543 193 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.33□□□□□ -1.88
PKP3Q9Y446 GPM6BP2-201ENST00000432046 144 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 AL159987.2-201ENST00000432754 307 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 AC092573.2-201ENST00000434546 243 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 Z82210.1-201ENST00000440037 231 ntBASIC3.33□□□□□ -1.88
PKP3Q9Y446 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms