Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 MIR3651-201ENST00000630427 90 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 TPTE2P4-201ENST00000258589 1605 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 MFSD8-233ENST00000641482 4860 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC093010.3-201ENST00000570269 15214 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 AC009812.4-201ENST00000569134 1805 ntBASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SSX2IPQ9Y2D8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 RNU4-76P-201ENST00000364509 141 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 Y_RNA.813-201ENST00000364639 102 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-629P-201ENST00000384061 103 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL391417.1-201ENST00000404100 426 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL356432.1-201ENST00000405809 419 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 NCOR1P3-201ENST00000420479 303 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 MTATP6P4-201ENST00000427725 675 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 TAAR7P-201ENST00000436141 242 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 NEFMP1-201ENST00000443423 1006 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 RPL21P8-201ENST00000465083 535 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AP002884.2-201ENST00000471647 395 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 MLLT10P2-201ENST00000506434 249 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 KLHL2P1-201ENST00000508691 521 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 RNU7-30P-201ENST00000516835 62 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 SNORA31.20-201ENST00000517111 133 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AC107953.1-201ENST00000522216 297 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AP006587.4-201ENST00000526053 529 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL356055.1-201ENST00000602528 446 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AC104763.2-201ENST00000604179 382 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 uc_338.5-201ENST00000611839 155 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL365204.3-201ENST00000612448 685 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL390240.1-201ENST00000612950 384 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AC112487.2-201ENST00000637950 304 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AL732372.2-225ENST00000642124 456 ntBASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.78□□□□□ -1.8
SSX2IPQ9Y2D8 AC118273.1-201ENST00000525324 3006 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.509-201ENST00000384506 99 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AL592114.1-201ENST00000403842 483 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 Z92545.1-201ENST00000411782 234 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 MTND3P8-201ENST00000412909 339 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AL645937.1-202ENST00000421799 937 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC008850.1-201ENST00000427546 362 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 RPL26P6-201ENST00000440913 438 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 FABP5P13-201ENST00000452144 328 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AL590639.1-201ENST00000456484 337 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 BX510359.1-201ENST00000456973 237 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 TRBV1-201ENST00000476502 284 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC117522.3-201ENST00000507974 584 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 SNORA70.18-201ENST00000516696 98 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 RN7SKP258-201ENST00000517151 304 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 RN7SKP256-201ENST00000517201 314 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 RN7SKP57-201ENST00000517248 293 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC005668.1-201ENST00000571142 476 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC008521.1-201ENST00000587471 187 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 BDH2P1-201ENST00000602288 736 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 AC012409.4-201ENST00000612923 249 ntBASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.77□□□□□ -1.81
SSX2IPQ9Y2D8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 RNU4-35P-201ENST00000362588 141 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 SNORA51.2-201ENST00000364595 132 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.373-201ENST00000365600 103 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.535-201ENST00000384612 99 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 RNU6-550P-201ENST00000391057 101 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 SNORA48.8-201ENST00000391324 134 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 CYCSP32-201ENST00000440548 321 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC020550.1-201ENST00000447385 163 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 U3.44-201ENST00000458938 192 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 Y_RNA.675-201ENST00000516389 149 ntBASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.76□□□□□ -1.81
SSX2IPQ9Y2D8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms