Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 AC008521.2-201ENST00000591021 259 ntBASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 OR13C1P-202ENST00000641378 2919 ntBASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 MUC2-202ENST00000613187 4845 ntBASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
VPS9D1Q9Y2B5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-756P-201ENST00000383997 107 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 SNORD78.1-201ENST00000390866 65 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-710P-201ENST00000410424 105 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-603P-201ENST00000411403 107 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 NDUFB4P8-201ENST00000435351 367 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 AL391987.1-201ENST00000441025 200 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 RN7SKP19-201ENST00000516016 252 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 RNU5F-2P-201ENST00000516066 82 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 SNORA43.3-201ENST00000517240 103 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 AC091178.2-201ENST00000584401 117 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 AC015813.4-201ENST00000610469 179 ntBASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
VPS9D1Q9Y2B5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 RNA5SP46-201ENST00000362370 120 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 RNA5SP435-201ENST00000364044 108 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 Y_RNA.328-201ENST00000365208 113 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 U3.37-201ENST00000408528 213 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 SDHDP6-201ENST00000414693 480 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AC074117.2-201ENST00000417130 397 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AC112498.1-201ENST00000444401 332 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AL359073.1-201ENST00000448036 403 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 RPS20P22-201ENST00000473700 357 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AC091179.3-201ENST00000474761 144 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 RN7SL583P-201ENST00000475692 287 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AC091912.1-201ENST00000511351 248 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-781P-201ENST00000516377 101 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 AL049872.1-201ENST00000556323 322 ntBASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS9D1Q9Y2B5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC006206.1-201ENST00000544842 3387 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 Y_RNA.281-201ENST00000364774 94 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-1107P-201ENST00000364817 104 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RN7SKP69-201ENST00000365390 305 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RNY3P5-201ENST00000384127 102 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RNU6-820P-201ENST00000384273 107 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 RN7SKP216-201ENST00000411050 312 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AC098614.2-201ENST00000426040 255 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 FTLP19-201ENST00000433300 394 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 snoU13.6-201ENST00000458785 104 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 snoU13.3-201ENST00000459441 104 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 AL591473.1-201ENST00000464297 313 ntBASIC5.48□□□□□ -1.53
VPS9D1Q9Y2B5 UQCRHP4-201ENST00000471686 272 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms